Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280
| | | | | | | | | | | | | | |
| Seq | MPQDASDGYERLTDIAEAAKNEGSELKHVIRDVYRNYSELGSDIHDYYEKNLKKFPETVEQTANDLYSFSQTFREDANKFLESMMEMSPPEKISGFNISKLFANSIFLLVIASFSRFVGSYITAPVFGIIFLNVGAIILSVVVVPIIATYVYQNLKVRSLAEKRIACAGFIFLQSVLIGFINQNDWLESVPFSVLTQIISSFSYPLILAHTDNRQKILGIVAGSSMIFHLAHGFFFSGMDGAFLTIAILYTILAICLIQYSIAFRCQTDFDMMLLTMQYVFLVSVVRMFAVMSFGK |
1 | 4yayA | 0.10 | 0.09 | 0.93 | 1.09 | FFAS-3D | | ---DLEDNWETLNDVIEKADN-AAQVKDALTKMRAAALDAQKDFRHGFDILVGQIDDALKLANKEAQAAAEQLKTTRNAYIQKILNSSDCPKAGRHNYIFVMI-PTLYSIIFVVGIFGNSLVVIVIYFFLLNLALADLCFLLTLPLWAVYTAMEYR-WPFGNYLCKIASASVSFNLYASVF------------LLTCLSIDRYLAIVHPMKSRLRRTMLVAKVTCIIIWLLAGLASLPIGLGLTKNILGFLFPFLIILTSYTLIWKALKKNDDIFKIIMAIVLFF--FFSWIPH-- |
2 | 3rkoB | 0.07 | 0.06 | 0.93 | 1.12 | CNFpred | | ----------FIASMVVLVLDNLLLMYLGWEGVGLCSYLLIGAAAMKAFVVTRVGDVFLAFALFILYNELTLNFREMVELAPAHFADGN---NMLMWATLMLLGGAVGKSAQLQTWLADAMAGPTPVSALIHAATMVTAGVYLIARTHGLFLMT---PEVLHLVGIVGAVTLLLAGFAALVQIKRVLAYSTMSQIGYMFLALGVQAWDA---AIFHLMTHAFFKALLFLASGSVILA-IPLVYLCFLVGGAALGFFSKDEILAGAMHINLMVAGLVGAFMTSLYTFRMIFIVFHGK |
3 | 6z16A | 0.05 | 0.04 | 0.75 | 0.83 | DEthreader | | APFLLALLVPF------------------------K--R--HVGWFVFPLPIALFVYFLSYIDVRNDEVI------------------------------VDGLSLLFALLITGIGSLVVSYLIYWFRDRSRYGQKSMLITMFGGLLMLGGFVAAIGGTYNIREL---G---K------A--APTPVSAYLHSTMVKAGIYVIALTFAVSSVWVWTVALVGLVTLCWASFL--KQTDLKAILAYSTVSQLGLITSLLGIGGLSFHYDENVFM-VAVLAAIFHLFNHATFKGSLMVT |
4 | 5h5mA | 0.07 | 0.07 | 0.99 | 0.51 | CEthreader | | IADAESTRENRKQKIVAECNNLRQALQELLTEYEKS-TGRRDDIPLGIAEVHKRTKDLRRHLRRAIVDHISDAFLDTRTPLILLIEAAKEGHE-ENTRYRSKMFQEHANEIVSVARLSCQLSSDVESVSVIQHTAAQLEKLAPQVAQAAILLCHQPTSKTAQENMETYKNAWFDKVRLLTTALDNITTLDDFLAVSEAHIVEDCERGIKGITACETVDCAAGSIRGRALRVCDVVDAILKTQRVDQFAERASALANRQEAHGLTWDPKEEEMNEFINACTLVHDAVKDIRHALLMN |
5 | 6o7ua | 0.09 | 0.09 | 0.93 | 0.62 | EigenThreader | | LLEQRQVIFECSKFIEVNLWRLLLKKVKRVIDVDTLNRQIDDLQRILDTTEQTLHTELLVIHDQLPVWSAMTKREKYVYTTLNKFQQHRTNKFTQAFQSIVDAYGATVVTFPFMFAIMF-----------GDMGHGFILFLMALFLVLNERKFGAMHRDEIFDMAFTGLLLMGAFSVYTGLLYNDIFSKSMT--ILLFSNSYKMKLSI------LMGYAHMTYSFMFSYINYRAK---NSKVDIIGNFIPGLVFMQLINMFLAPGTIDDQLYVVLLLAALVCVPWLLLYKPLTLRR |
6 | 6iu3A | 0.13 | 0.07 | 0.54 | 0.43 | HHpred | | -------------VAAGAIKSEADNYARELKREQEEIIREAAEVAEILARYG-IEPHEYGPVVNAL----RKKPQAWLDFMKFELGLEKPDP--------KRALQSA--FTIAIAYVLGGLV--PLIPYMFIPVASVILTLMALLIFGYAKGYFTDNKFKSALQTALIGAASAAAFGMAKAVQSENLYFQ---------------------------------------------------------------------------------------------------------- |
7 | 5z96A | 0.10 | 0.10 | 0.99 | 0.45 | MRFsearch | | ---HEVDSLRHSRSRLNIYKALAFLTAFQLSWELQELSKVENEFKSEYEELSRQCKQFAKDLLDQTRSVAQPNCQQLLASRWYDEFPGWRRRHWAVKMVTCFIIGLLFPVFSVCYLILGLFIRKPFIKFICHTASYLTFLFLLLLASQHIDNRQGPPPTIVEWMILPWVLGFIWGEIKQMWDGHDWWNLMDFVMNSLYLATISLKIVAFVKWHPTLVAEALFAIANIFQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYFYYEETEFTEFVGATMFGTYNVISLVVLLNMLIAM |
8 | 6me6A | 0.08 | 0.08 | 0.94 | 1.05 | FFAS-3D | | --ADLEDNWETLNDVIEKADN-AAQVKDALTKMRAAALDAQKDFRHGFDILVGQIDDALKLAVKEAQAAAEQLKTTRNAYIQKYLGDGARPSWVAPALSAVL---IVTTAVDVVGNLLVILSVLRLVSLAL---ANLVVAFYPYPLILVAIFYDGWAFGEEHCKASAFVMGLSVIGSVWNITA--------IAIDRYLYICHSMAYHRIYRRWHTPLHICLIWLTVVALYTAAVVVIHFLLPIAVVSFCYLRIWVLVLQKDQFEEVECLKPSDLRSFLTMFVVFVIFAICFAPL-- |
9 | 6r9tA | 0.06 | 0.06 | 1.00 | 0.77 | SPARKS-K | | SSIPAQIS-PEGRAAMEPIVISAKTMLESAGGLIQTARALAVPSWSVLAGHSRTVSDSIKKLITSMRDKAQLECETAIAALNSCLQLAPREGISQEALHTQMLTAVQEISHLIEPLANAARAEASQLGHKVSQMAQYFEPLTLAAVGAASKTLSHPQQMALLDQTKTLAESALQLLYTAKEAGGNAGVVGGMVDSITQAINQLDEGPMGEPEGQTTMVRTAKAIAVTVQEMVTKSNTSPEELGPLANQLTSDYGRLASEAAAVAAENEEIGSHIKHRVQELGHGCAALVTKAGALQ |
10 | 4he8F | 0.08 | 0.07 | 0.91 | 1.06 | CNFpred | | ----------MLTLVLADSYPVMFIGWEGVGLASFLLIGFYADSARKAFIVNRIGDLGFMLGMAILWALYTLSISELKEAMEGPL--------KNPDLLALAGLLLFLGAVGKSAWLPDAMAGPTPVSALIHAATMVTAGVYLIARSSFLYSVL---PDVSYAIAVVGLLTAAYGALSAFGQTDKIVAYSTISQLGYMFLAAGVGAYW----VALFHVFTHAFFKALLFLASGSVIH-TRWHALIGALALFWSKDAILAATLTYPFGGVGFYVGALLVAVLTAMYAMRWFVLVFLG |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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