Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200 220 240
| | | | | | | | | | | | |
| Seq | MASLLLLVLAAAVTAQLNIVPSTHPEVCVLYADDHQADANKFNGNFTQIFHSYNSITLSFMSYSSSSYDVIDIISKYDLSSCNILAIDVFNASMDFNVFLQSTNNCSKYNANKVHHVKLPRGEEWFSYSKNLKFCPLSDSLIGMYCDTQLSDTYFEISTGGTYEVTDIPEFTQMGYTFHSSEEFYLCHRISSEAWLNYHLFYRDYDVSGVISKQVNWGNVWSGFKTFAQVLYKILDLFFNSKRNVEPRA |
1 | 5jp0A | 0.04 | 0.03 | 0.73 | 0.67 | DEthreader | | ----------------TLEQ-K-IGQCEITIDVSDLETSRKKGF-C-LSEAMLDTVIKYVLLVPLQKWEAIKQIQEKSMIGIPCIYGVDQTTYTLATIWTEYNVAACMKKHFAFLAVRQ---GALSVMVNSFNLLTEW---E--D---------IVTDWAD---VGIDRIDD---R-----------RLKYRLGLF-P---W-SWQGHVASSNGGDALANLGDANVAGKSLEPGET-KT-------GDQ |
2 | 1tubA | 0.04 | 0.02 | 0.67 | 0.67 | DEthreader | | VGQAGVQIGNACWELYCLEHDGQGKPRAVFVD--LE--PT-VIDEVRTGTYRQLFHPEQLITGIGKIILVLRKLADQCTGLQGFSVFHGSGTSLLMERLSYGKKSKTTL----CAF--LLNVDLFQLVRG-FPLATY-APVI----ACFEPANQMVKC---------CLLYFKVLSNTAIEAW--------------------YEFAREDMA------------------------------------- |
3 | 3gztQ | 0.16 | 0.14 | 0.86 | 7.53 | HHpred | | -----------------PITGSLTSTLCLYYPTEAATEI---ND--NSWKDTLSQLFLTTSVYF-KEYTDIASFSVDPQLYCDYNVVLMKYDMSELADLILNEWLCNPMDITLYYYQQTDEANKWISMGSTIKVCPLNTQTLGIGCLTTDTATFEEVATAEKLVITDVVDGVNHKLDVTATCTIRNCKKLGPRE--NVAVIQVGTAPQTERMMRINWKKWWQVFYTVVDYVNQIIQAMSK--------- |
4 | 3gztQ | 0.07 | 0.06 | 0.82 | 2.26 | DisCoVER | | ----QEETFL-------TS-----TLCLYYPTEAATEINDNKDTLSQLFLTKGWPTGSVYFKEYTD-IASF--SVDPQLYCDYNVVLMKYLQLDMSELADLNEWLCNPMDITLYYYQQTDE-ANKWISMCTIKVCPLNTQTLGIGCLTTDTATFEEVATAEKLVIT-DVVDGVNHKLDVTTCTIRNCKKLG-PRENVAVIQVGGLWKWWQVFYTVVDYVNQII-QAM--S------------------- |
5 | 3gztQ | 0.15 | 0.13 | 0.84 | 2.28 | MRFsearch | | ----------------------LTSTLCLYYPTEAATEIN-----DNSWKDTLSQLFLTKSVYFKE-YTDIASFSVDPQLYCDYNVVLMKYDMSELADLILNEWLCNPMDITLYYYQQTDEANKWISMGSTIKVCPLNTQTLGIGCLTTDTATFEEVATAEKLVITDVVDGVNHKLDVTATCTIRNCKKLGP--RENVAVIQVGGAPQTERMMRINWKKWWQVFYTVVDYVNQIIQAMSK--------- |
6 | 3gztQ | 0.15 | 0.14 | 0.92 | 2.65 | SPARKS-K | | ---PITGSMDTAYANSTQEETFLTSTLCLYYPT---EAATEINDN--SWKDTLSQLFLTKGSVYFKEYTDIASFSVDPQLYCDYNVVLMKYDMSELADLILNEWLCNPMDITLYYYQQTDEANKWISMGSTIKVCPLNTQTLGIGCLTTDTATFEEVATAEKLVITDVVDGVNHKLDVTTTCTIRNCKKLGPRE--NVAVIQVGTAPQTERMMRINWKKWWQVFYTVVDYVNQIIQAMSK--------- |
7 | 3gztQ | 0.13 | 0.11 | 0.84 | 1.00 | MAPalign | | -QEETFLT----------------STLCLYYPTEAA-TEINDNSWKDTLSQLFLTGSVYFKEYTD--IASF---SVDPQLYCDYNVVLMKYDMSELADLILNEWLCNPMDITLYYYQQTDEANKWISMGCTIKVCPLNTQTLGIGCLTTDTATFEEVATAEKLVITDV--VDGVNHKLDVTCTIRNCKKLGP--RENVAVIQVGQTERMMRINWKKWWQVFYTVVDYVNQIIQAMSK------------ |
8 | 3gztQ | 0.14 | 0.13 | 0.94 | 1.20 | CEthreader | | ---PITGSMDTAYANSTQEETFLTSTLCLYYPTEAATEIND-NSWKDTLSQLFLTKGWPTGSVYFKEYTDIASFSVDPQLYCDYNVVLMKYDMSELADLILNEWLCNPMDITLYYYQQTDEANKWISMGSTIKVCPLNTQTLGIGCLTTDTATFEEVATAEKLVITDVVDGVNHKLDVTTTCTIRNCKKLGPRE--NVAVIQVGGSPQTERMMRINWKKWWQVFYTVVDYVNQIIQAMSK--------- |
9 | 3gztQ | 0.17 | 0.14 | 0.88 | 1.55 | MUSTER | | -----------------PITGSLTSTLCLYYPTEAATEINSWKDTLSQLFLTKGWPTGSVYFKE---YTDIASFSVDPQLYCDYNVVLMKYDMSELADLILNEWLCNPMDITLYYYQQTDEANKWISMGSSIKVCPLNTQTLGIGCLTTDTATFEEVATAEKLVITDVVDGVNHKLDVTTTCTIRNCKKLG--PRENVAVIQVGTAPQTERMMRINWKKWWQVFYTVVDYVNQIIQAMSK--------- |
10 | 3gztQ | 0.16 | 0.14 | 0.88 | 1.90 | FFAS-3D | | --------------------TFLTSTLCLYYPTEAATEDNSWKDTLSQLFLTKGWPTVYFKEYTDIASFSVDPQLYCDYNV--VLMKYDATLQLDLADLILNEWLCNPMDITLYYYQQTDEANKWISMGCTIKVCPLNTQTLGIGCLTTDTATFEEVATAEKLVITDVVDVNHKLDVTTATCTIRNCKKLGPRENVAVIQVTADPTTAPQTERRINWKKWWQVFYTVVDYVNQIIQAMSK--------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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