Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | MTLVMGSCCGRFCDAKNKNKKEDVEEGREGCYNYKNLNDLDESEARVEFGPLYMINEEKSDINTLDIKRRYRHTIESVYF |
1 | 6b9mA2 | 0.10 | 0.06 | 0.65 | 0.55 | DisCoVER | | QWLEPGMIVMVNY-------------NPDDPKER---------GYWYDAEIQRKRREV---F--GKILLDCRIMFVTEI- |
2 | 3i9v1 | 0.06 | 0.05 | 0.88 | 0.83 | DEthreader | | ---YLICNADE-DRYILPLLIEGMILAGRATVGYLH-V-HRGAGAICGE--ETMNEG-LRANP-RLKPPFPQSGKTTINV |
3 | 5colA | 0.12 | 0.12 | 1.00 | 0.66 | CEthreader | | KEVVEVLVTGGRATAGPPLGPAIGPLGVNVMQVVKEINEKTKDYEGMQVPVKVIVDTEKFEIEVGIPPTTALIKKELGIH |
4 | 4cwcA | 0.10 | 0.10 | 1.00 | 0.65 | EigenThreader | | PELSFDAMTIVGNLNKALKVYIEYDKVNMRVEFNPNKLWLKQNIIGFTRLDLAFDFEDHLWRVEIELKRDMVDYWNDCFN |
5 | 2ys5A | 0.20 | 0.16 | 0.80 | 0.29 | HHpred | | ----GSSGSSGLN--R-----DSVPDNHPTKFKVTNVDD----EG-VELGSGVMELTQRREAVRWPCLRRYGYDSNLFSF |
6 | 2pffB | 0.14 | 0.05 | 0.35 | 0.93 | MRFsearch | | --VIVAGTLDINPDDDYGFKQGGGGGGGGG-------------------------------------------------- |
7 | 4xhfA3 | 0.08 | 0.06 | 0.79 | 0.24 | FFAS-3D | | -PLLINLDTGKVDSDANVLDFDERMAAINPETSSTPKKDIAKIKTRANDARVFKVFDDSGKLSS---------------- |
8 | 4r5oA3 | 0.11 | 0.10 | 0.95 | 0.72 | SPARKS-K | | GKVLSNDTYKDKYYDVNELIAA----KEGEAPAVTELDIIQKQKINFVLGNVYTLESADNGCNIVKIKNDFTLEKVFANF |
9 | 1epwA | 0.22 | 0.09 | 0.40 | 0.65 | CNFpred | | ---------------------------------------------FIWMKYFSIFNTE---LSQSNIEERYKIQSYSEYL |
10 | 3bs8A | 0.07 | 0.06 | 0.86 | 0.83 | DEthreader | | VVVRMVSGTEAHVEPVPFLGLRDITEGSL--LI-FDEMTGFDYNCCLG---GAYGG-KAIMQIAQAGTLS-GNLAAG--- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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