>PF05796 (215 residues) MPFRDLILFHLSKFLLTENEDSIKMFVSLCRGFDVNAEHLILTVLNKKYLKKLTKVIRHE ALLPEITVCFQDNIVYELIRLRLYKFSKQIKASYKLTESMKGIAYIKDQKIYLSRVNDEL LDFLLTEYTPHIYKYYPGKPDTIIGAKIILCGYNKITFFTYYTTHVVTNQYINVIVTDKC IDSLLQPQHHSLLKKIFDGSSDVINKVLKHIFYSV |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 | | | | | | | | | | | |||||||||||||
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Seq | MPFRDLILFHLSKFLLTENEDSIKMFVSLCRGFDVNAEHLILTVLNKKYLKKLTKVIRHEALLPEITVCFQDNIVYELIRLRLYKFSKQIKASYKLTESMKGIAYIKDQKIYLSRVNDELLDFLLTEYTPHIYKYYPGKPDTIIGAKIILCGYNKITFFTYYTTHVVTNQYINVIVTDKCIDSLLQPQHHSLLKKIFDGSSDVINKVLKHIFYSV | |||||||||||||||||||
1 | 6iowA | 0.07 | 0.06 | 0.87 | 0.64 | DisCoVER | VRAQENKQRIVL--PEGLEPRTLEAADRLMADKVVNI--IL--IGVENPLYLGGLIAGAQDVAPGMSVSGT---F--LL-FTKALLLVADCAVIPN-PTADELAQI----AVAT------AR-TAKAIAPRVAMLVVEATMALIDGEMQAAALVERVAALKASNVAGKANVLVFPTLGNAYKLVERLGH--AEAVGISVEDIYRMVAITANQAI- | |||||||||||||
2 | 3qdeA | 0.08 | 0.07 | 0.80 | 0.83 | DEthreader | ---PY-PW-INY-SLFRDARRITRYRYNN-IDM--ECRHGLGYTYQCMVTFNMSRSAGIGRGMGFRDS--------------D---GF-DDLWLVPLIGRADWNDC------L-NLNCFSTVPSF---------AYDDGRKVGNEKIFIEGFVLLVKLDTLVQNPAFTRYYSNAFNNAWIICAEMAFDYYRKIAAYIEDVSDIHKLVAGKDAKRH | |||||||||||||
3 | 1bc0A | 0.12 | 0.12 | 1.00 | 0.61 | CEthreader | MKGLGTDEDSILNLLTARSNAQRQQIAEEFKTLGRDLVNDMKSELTGKFEKLIVALMKPEKVLTEIIASRTPEELRAIKQAYEEEYGSNLLQANRDPDTAIDDAQVELDAQALFQADEEKFITILGTRSVSHLRRVFDKYMTISGFAVVKSIRSIPAYLAETLYYAMKGAGTDVIVSFNIRKEFRKNFATSLYSMIKGDTSGDYKKALLLLCGGE | |||||||||||||
4 | 1vt4I3 | 0.05 | 0.04 | 0.78 | 0.55 | EigenThreader | YLDQYFYSHIGHHLKNIEHPERMTLFRLEQKIRHDSYKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIALHKQVQRGGGGGGGGGGGGGGGGGGGGG-GGGGGGGGGGGGG--------GGG--GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG------------------------------------G | |||||||||||||
5 | 3wvqA2 | 0.15 | 0.12 | 0.79 | 0.31 | HHpred | --------------------WPDAVVADLADALGCPEASGGLIGSSKAAFRALAAGAG--VALPAGAVCADRRRAHRHVTLLDEGSPVILKQDY--GSGSDGNEILSRTPLRVLADSAALDAYLDERWGRHVERYHPGSRAYISDGGVRLGGHGER-Y-----RPLPDSQV-PADLDQAQLDDLVE-GGRVALHALGYRGV-------------- | |||||||||||||
6 | 4rr2D | 0.14 | 0.10 | 0.71 | 0.52 | MRFsearch | -RRRDHISHFILRLAYCQSEELRRWFIQ-------QEMDLLRFRFSILPKDKIQDFLKDS----QLQFEAISDEEKTLREQEIVASSPSL----------SGLKLG--FESIYKIPFADALDLFRG-------------------RKVYLED-------------------GFAYVPLKDIVAIILNEFRAKLSKALALTDERLQPLLNHLSHSY | |||||||||||||
7 | 6hwwA | 0.13 | 0.11 | 0.87 | 0.60 | FFAS-3D | -SSSDLYNWKNNNPSFSEDPGKLALIESVLTTHQPTWDDLLGTLLTGEEKQRVLLEARKTQLPNEVDAAFPTQRGRNHLVLYRQLLLAGMQNAGRSPTNLAKVKGITQG---PNESPSAFLERLKEAY----RRYTPYDPEDPGQETNV-----SMSFIWQSAPDI-----------GRKLERLEDGDLVREAEKIFNKRETPEEREERI----- | |||||||||||||
8 | 5w1hA4 | 0.11 | 0.11 | 0.95 | 0.51 | SPARKS-K | KLNRNIILSKLYRRFLEKSRSDIVEYYKLKKETSFDSEDEQKNIKKFQEMKNIVDLMDYSEIADELQINWIYLRERDLMNFQLGYHYACLNNDSNKQATYVTLDYQGKKNRKINGA---ILYQICAMYINGLYYVDKDSSEWTSDGK----ESAKIGEFYRYAKSFENTSDC----YASGLEIFENISEHDNITELRNYFDRSFLGIYSEVFDRF | |||||||||||||
9 | 4rzpA | 0.10 | 0.09 | 0.87 | 0.60 | CNFpred | --IDAGALEKLVELLTHDDSKVQQEAARALANIASGNDEAIKQVIDAGALEKLVELLTHD------DSKVQQEAARALANIAIKQVIGALEKLVELL--SKVQQEAARALANIASGNDEAIKQVIDAALEKLVELLTH-----DDSKVQQEA---ARALANIAS-----------GNTSAIKQVIDAGALEKLQELLTHDDSKVQQEAQRALENI | |||||||||||||
10 | 6uutA | 0.06 | 0.05 | 0.87 | 0.83 | DEthreader | ---------GAAPSFDASGIQN-SEQL-NE------LYKFFNPIAQVA-GRVIVIG-TTPAAQRALGFIVGKGITAFLSPRSAYWPLALVASRGIG-----E-IALAGAHVICL-DVPQQQADLDRVAADIGGSTLAIKAAAGLDIIVHNAGITVINLAAEVNDYLDGLNGRIVCV---SSISGIAGAAKAGVIGLVKFTPILKITINANGNVVR | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |