>PF05762 (220 residues) RKALSAILLPLDRVRTRRYRRSHRPVRIDPRSTMRDAMRFGGDFILPRFREPRLVHPPLV VLADISGSMSKYTRIFLHFLHALTEQRHRVHTFLFGTRLTNVTRQMRNRDPDEALDDCIA AVKDWSGGTRIGETLHDFNRRWSRRVLGQGAVVLLMTDGLERDDTAELETEIDRLHRSCR RLVWLNPLLRFDGFEARARGVRAMLPHVDEFRPLHNLESV |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | RKALSAILLPLDRVRTRRYRRSHRPVRIDPRSTMRDAMRFGGDFILPRFREPRLVHPPLVVLADISGSMSKYTRIFLHFLHALTEQRHRVHTFLFGTRLTNVTRQMRNRDPDEALDDCIAAVKDWSGGTRIGETLHDFNRRWSRRVLGQGAVVLLMTDGLERDDTAELETEIDRLHRSCRRLVWLNPLLRFDGFEARARGVRAMLPHVDEFRPLHNLESV | |||||||||||||||||||
1 | 3k71G | 0.10 | 0.08 | 0.85 | 1.17 | DEthreader | -----------------PEAVMCGPTVHHECG---R---------NMYLQECPRQEQDIVFLIDGSSINFTMMNFVRAVISQFQRPSTQFSLMQFSNKFQTHFTEFRRSS--NPLSLLASV-HQLQGFTYTATAIQNVVHRLFHAARDAAKILIVITDGKKEGDSLDYKDVIPMADAAGIIRYAIGVG-L-AFQNRNSWKELNDIASKPHIFKVDALKDI | |||||||||||||
2 | 6m3yA | 0.15 | 0.13 | 0.85 | 1.17 | DEthreader | ----------------------------T-DNIR--PTYPTNNQRYLKFDNKQQKPVDIVLVVDMSGSMENRAGAVRTGVKNFLTIGVNVGLIGFSSSGYISVKLGKNASQQQAINGALS-PR-FQGGTYTQIGLRQGSAMLNADTSGNKKMMILLTDGVPADTWPATLGEAKIAKDSGNEVHALGIQLADMTKEKIRQNMQLITNSPDLYEDADAVEAY | |||||||||||||
3 | 4cn8A2 | 0.15 | 0.11 | 0.75 | 1.56 | HHpred | -----------------------------------------------VCVVDCAGHADIAFVFDASSSINANYQLMKNFMKDIVDRGTQFAVVTFADRATKQFGLKDYSSKADIKGAIDKVTPSIIGQTAIGDGLENARLEVFPNR-EVQKVVILLTDGQNNGHKS-PEHESSLLRKEGVVIVAIGVGTGFL-----KSELINIASSEEYVFTTSSFD-L | |||||||||||||
4 | 4igiA | 0.12 | 0.08 | 0.70 | 0.62 | DisCoVER | -------------------------------------------------------EKDVVFLIDGSEGVRGLKDFVQRVVESLVGDRVRVALVQYSDRTRPEFYLNSHMDQQGVISAIR-RLLLGGPTPNTGAALEFVLNILTSSRIGVPQLLIVLTAEPSGD---DVRGPSVVLKQGGAVPIGIGIGN------ADISEMQTIS-FIFAVAITFRLGT- | |||||||||||||
5 | 6qt8A | 0.16 | 0.15 | 0.94 | 0.42 | MRFsearch | --LSQSLSSQLRLILTPTQSTKLAKKIIPYIASSYK-----RDKIWMRRAIPSKRAYQILLCVDDSSSMSDALESLVMVARALTVLAGQIGVMGFGTDVFVAHALTDPFTSQDAGARVLQQFTFRQDSTDMVLLLRRTIDHFREARLDLWQLALILSDGLVQRDHARLRPLLREAMEQRVMVVFIVMD------DASVLELKEARFGFPYYLIVHHLEDL | |||||||||||||
6 | 1shuX | 0.16 | 0.12 | 0.73 | 0.99 | SPARKS-K | ---------------------------------------------------SCRRAFDLYFVLDKSGSVANNWIEIYNFVQQLAEREMRLSFIVFSSQATIILPLTGD---RGKISKGLEDLKRVVGETYIHEGLKLANEQIQKAGGLTSSIIIALTDGKLDGLPSYAEKEAKISRSLGASVYCVGVLDF------EQAQLERIADSKEQVFPVKGLKGI | |||||||||||||
7 | 3txaA | 0.11 | 0.11 | 0.97 | 0.84 | MAPalign | -KVGEQYKALNPINGKDGRREIAEGWLSKK--ITGVNDLDKNKYKIELTVEGLNQPLDVVVLLDNSNSMLKAGEAVEKLIDKITNKDNRVALVTYASTIFYSYLLTNDAEVNILKS-RI--PKEAFGATFTQKALMKANEILETQSNARKKLIFHVTDGVPTMSGEPTTLYFNNIRPKGYDIFTVGIGVNGDPGATPEKFMQSISSKTENYTNVDIYDEL | |||||||||||||
8 | 2i6qA1 | 0.13 | 0.10 | 0.78 | 0.54 | CEthreader | ----------------------------------------------SKIQIQRSGHLNLYLLLDCSQSFLIFKESASLMVDRIFSFNVSVAIITFASEPKVLMSVDNSRDMTEVISSLENANYKDGTGTNTYAALNSVYLMMNNQMREIRHAIILLTDGKSNMG-GSPKTAVDHIREILLDIYAIGVGKLD-VDWRELNELGSKKDGERHAFILQDTKAL | |||||||||||||
9 | 6qt8A | 0.15 | 0.15 | 0.95 | 0.65 | MUSTER | QALSQSLSSQLRLILTPTQSTKLSGKIIPYYKRDKIWMRRA---------IPSKRAYQILLCVDDSSSGNLALESLVMVARALTVLAGQIGVMGFGTDVFVAHALDPPFTSQDAGARVLQQFTFRQDSTDMVLLLRRTIDHFREARLIQWQLALILSDGLVQSDHARLRPLLREAMEQRVMVVFIVMARFGPDGVPVIHRYLDSFPF-PYYLIVHHLEDL | |||||||||||||
10 | 6qt8A | 0.16 | 0.15 | 0.95 | 1.51 | HHsearch | QSLSSQLRLILTPTQSTKLS-GA-KKIIPYIASYKRDK-----IWMRR-AIPSKRAYQILLCVDDSSSMSDALESLVMVARALTVLAGQIGVMGFGTDVFVAHALTPPFTSQDAGARVLQQFTFRQDSTDMVLLLRRTIDHFREAREDLWQLALILSDGLVQSDHARLRPLLREAMEQRVMVVFIVMDDASVLFGPVHRYL-DSFPF-PYYLIVHHLEDL | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |