>PF05760 (325 residues) ECAIDAQNIISISLQKIHNSRTQRGGIKLHKNLLVTYVLANARDFYMSVEFAGMYSIQQN GEMRTVSDEKQDSFELTGNCDDIAGEFCCNYSGDSLDTYHCAAPQSAGYPAMVPEAHTQT VPACPMAPVRHCDLNPAMVPEAHTQTVISCPMAPVRHCDSNLLDSEIRWDYYSEPYTFKR DILISNTPNNQKTVLDLDTHVVTTVDYGYLHADYCLSFKQHGQCLQGSPKKRKIDSSYVS DSDYLSDFLPMSCKQIRSEDVYCCNSEQLDTNNISNLMSVLDSGFNELLNWQTDLEQVGL VNGQTNCCKQALACSGAWTRAIEAF |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 | | | | | | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | ECAIDAQNIISISLQKIHNSRTQRGGIKLHKNLLVTYVLANARDFYMSVEFAGMYSIQQNGEMRTVSDEKQDSFELTGNCDDIAGEFCCNYSGDSLDTYHCAAPQSAGYPAMVPEAHTQTVPACPMAPVRHCDLNPAMVPEAHTQTVISCPMAPVRHCDSNLLDSEIRWDYYSEPYTFKRDILISNTPNNQKTVLDLDTHVVTTVDYGYLHADYCLSFKQHGQCLQGSPKKRKIDSSYVSDSDYLSDFLPMSCKQIRSEDVYCCNSEQLDTNNISNLMSVLDSGFNELLNWQTDLEQVGLVNGQTNCCKQALACSGAWTRAIEAF | |||||||||||||||||||
1 | 3j65q | 0.07 | 0.06 | 0.82 | 0.71 | DisCoVER | AIAGHGSTILSAFAPHTS---------------SRMVT--------GAGD------NTAR-IWD-CDTQTPMHTLKG--H----YNWVLCVSWSPDGEVIATGSMDNTIRLWDPKSGQCLGDALRGHSK-WITSLSWEPIKPRLASSSKDGTIKIWDTVSRVCQYTMSG-HT---NSVSCVLLYSGSHDRTVRVWDINGRCINILHAHWVNHLSMVTASDDYTMHQKLVNHVAFSPDGRYIVSASFDNSIKASVYQVAWSSDCRLLVSCS-KDT-TLKVWLPGDEVYTVDW---------SVDGKRVCS-GGK---DKMVRLWT- | |||||||||||||
2 | 3ir7A | 0.03 | 0.02 | 0.74 | 0.67 | DEthreader | --DWCPPASPTWEQTDVP--ESADWYSMIIVGNHYVGQE------QAFARHMNSTSYFYNQWINVRRFAEQPENHPRNLFIWRSNLLGSSGKGHFMKYLLGTEHGIQ--G--LVYSDIIL-------------------DPEAKSDWEIYKAIAKKFSEVCVGHLGKE-TD----VERDYATYERFTSIGP-------------------GNGGAWTEMLDAAEM-L--PETAWLALNKE-DEKIRFRDIR-IISSPTWSG-LEDEVSYN------------------GYTNVHELIPWRTSGRQQQIGYAHLAYGFYYGTV--- | |||||||||||||
3 | 1vt4I3 | 0.05 | 0.05 | 1.00 | 0.93 | CEthreader | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG | |||||||||||||
4 | 5jqyA | 0.06 | 0.06 | 0.89 | 0.57 | EigenThreader | -------------KPKLLNKFDKTIKAELDAAEKLRKRNAFKELVRKYPQSPRARYGKAQCEDDLAEKRRSNEVLRGAIETYQEVASLPDVPADLLKLSLKRRSDRQQFLGHMRGSLLTLQRLVQLFPND------------TSLKNDLGVGYLLIGDNDNAKKVYEEVLSVTPNDGFAKVHYG------FILKAQ----NKIAESIPYLKEGIESGDPGTDDGRFYFHLGDAMQRVGNKEAYKWYELGHKRGHFASVWQRSLYNVNGLKTGYTELVKSLERNWKLIRDEGLAVMDKAKGLFKGAPKTCTLLEKFPETTGCRRGQ | |||||||||||||
5 | 6fj3A | 0.16 | 0.05 | 0.32 | 0.57 | HHpred | -----VAVLILAYFRRLHCTR-----NYIHMHLFLSFMLRAVSIF-VMDASEGLYLHSLIF--KAFFSE-KKYL-----W------------GFTVFGWG--------------------LPA------IFVAV--------------WVSV------R-ATLANTGCWDLSSGN-NKWIQVP---------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
6 | 2gafD1 | 0.27 | 0.04 | 0.16 | 0.48 | MRFsearch | -------NIQKIT--------------VFNKDIFVSLVKKNKKRFFSDDRILSYFSKQT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QTYNIGKLFTIIE------------------------------------------- | |||||||||||||
7 | 6ezoE | 0.07 | 0.07 | 0.98 | 0.38 | FFAS-3D | ---MEFQAVVMAVMTDLTSSI-PKPLLPVGNKPLIWYPLNLLERVGFEEVI--VVTTRDVQKALCAEFKMKMKPDIVCIPDDADMGTAIYPKLKTDVLVLSCDLITDVALHEVVDLFRAYDASLAMLMRKRDFIGVDSTGKRLLFMANEADLDEELVIKGSILQKHPRIRFHTGLVDAHLYCLKKYIVDFLMENGSITSIRSELIPYLVRKVHIMKEGLCSRVSTLGLYMEANRQVPKLLSSAQIVSKHLVGVDSLIGPETQIGEKSSIKRSVIGS-SCLIKDRVNCLLMNSVTVEEGSNIQGSVICNNAVIEKGADIKDCLIG- | |||||||||||||
8 | 4nl6A | 0.10 | 0.07 | 0.74 | 1.31 | SPARKS-K | ------------------------------------------------------MAMSSGGSGGGVPEQEDSVLFRRGTGQSDDSDIASFKHALKNGDICETSGKPKTTPKRKPAKKNKSSEDGCIYPATIASIDFKRETNREEQNLSDL-LSPICEVANNIEQNAQENENESQVSTDESENSRSPGNKSDNIKPKSAPWNSFLPPPPPMPGPRLGPGKPGLKFNGPPPPPPPPPPHLPFPSGPPIIPPPPPICPDSLDD-ADALGSML----ISWYMSGYHTGYMGFRQKEGRCSHSLN------------------------- | |||||||||||||
9 | 6hluA | 0.09 | 0.06 | 0.68 | 0.67 | DEthreader | -------KWYLSLS---ITDIS--NQITLGNKLSSLSGLSSSSQLSRNSSNQI--------------------SRNQISDILKLWLNLELSSNQITDIAPLASLKS----IPLASISPLALPEESIALVHL-------QAPNIKLFHFWDFGGQEI--------------MHASHQFFMRSVYIEGKSPVIVVMNKIDEPSYNIEQKIRF-F-II---LG-QFELCPSNLPTQIDI-----------RMQWRYGMVKVVATITEFIPLPG--------------E-MGRDE---------G--EKVFSV--SK-M--LDSVISKE | |||||||||||||
10 | 2atyA | 0.09 | 0.09 | 0.94 | 0.71 | MUSTER | GSPPPILNG-RISYYSTP---IAVGTIRYS-------------SGTFRLIGEKSLLCITKDKVDGTWDKPAPKCEYFNKYSSCPEPIVPGGYKIRGSTPYRHGDSACKTNFSMNGNKSQANNMWGPTRLPTCVSVFPLEGSIEGRGGSELADPEVPRDCGCKPCICTVPEVSSVFIFPPKPKDVLTITLTPKVVVDISKDDPEVQDDVEVHTAQTQPREEQFNSTFRSVSELPIMHQDWLNGAAFPAPIEKTISKTKGRPKIPPPKEQMAKDKVS-LTMITDFFWNGQPAENYKNTQPIMNTNESYFVYSKL-NVQKWEAG-SVL | |||||||||||||
|
|
References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |