Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | FALSQLSVANEDNSARLLVSKQILNKYLVENRDIVVKYTLYNVGSGAAVNVQLVDNGFHPEAFTVVGGQLSATIDRIAPQTNVTHIAVVRPKAYGYFNFTAAEVNYQPAEEVTELQFAVSSEPGEGAIVAEAQFNKQFSSHYLDWFAFAIMTLPSLAIPYGLWFSSKSKYEL |
1 | 6rqfK | 0.05 | 0.05 | 0.85 | 1.17 | DEthreader | | -------------LANKPVDIEV-PQAVLPDTVFEAVVRIPYDMQLKQGLNVGAVLILP-EGFELAIMFVIGPVPGQ---KYSEITFPILAPDPVLYPIYVGGNRGRG---SNNNGGFGQG-DAEVVLQDPLRIQGL--LFFFASVILAQIFLVLKKKQFEKVQLSEMN-F- |
2 | 1xezA | 0.10 | 0.09 | 0.89 | 1.17 | DEthreader | | FYISVNRAISDPFCKANISLIYRVN-LERDAKIVRISLTGGIHLNAIAQDYRFVFN-ASNNKAQILKTAVSFTWNRLSASFVPKMDVIYKASETGSTDFIIDSSVNIRPIETPRRRITKSA-SFTVDWHFTGGRPFASAYTD-VFNAQ-----RVGQDNLSG---------- |
3 | 1f13A5 | 0.15 | 0.09 | 0.58 | 1.14 | HHsearch | | -------------IPEIIIKV---RGTQVVGSDMTVTVEFTNPLKETLRNVWVHLD-GP--GVTRPM---KKMFREIRPNSTVQWEEVCRPWVSGHRKLI---ASMSSDSLR-HV-----YGELDVQIQRR----------------------------------------- |
4 | 3k71G | 0.08 | 0.07 | 0.88 | 1.00 | DEthreader | | --------NLVNGVLWVGVSMQFIPAEIPAQTLVQSNICLYIDKRDLQSSVTLDLAPGLSPRATFQETKLSRVRVLGL--KAHCENFNLLLPVDSTPITLRLNFTLVKLAFNLRPMLARYFT-ASLPFEKNCGADHICQDNLSY-TT-ITFSHC-SAPVGSQGT------V- |
5 | 6rqfK2 | 0.05 | 0.05 | 0.85 | 1.17 | DEthreader | | -------------LANKPVDIEV-PQAVLPDTVFEAVVRIPYDMQLKQGLNVGAVLILP-EGFELAIMFVIGPVPGQ---KYSEITFPILAPDPVLYPIYVGGNRGRG---SNNNGGFGQG-DAEVVLQDPLRIQGL--LFFFASVILAQIFLVLKKKQFEKVQLSEMN-F- |
6 | 2pn5A | 0.08 | 0.06 | 0.80 | 1.00 | DEthreader | | -FGKPPDTT----VQPFYIVENL-PYSIKRGEAVVLQFTLFNNLGAEY-IADVTLYNVA-NQTEFVGRSYTKSVS-VPPKVGVPISFLIKARKLGEMAV-RVKASIM------LGHETDAL-EKVIRVMPESLVQPGVPLIEVT-LPVPTLTAYR----------------- |
7 | 4u48A2 | 0.18 | 0.13 | 0.70 | 0.62 | HHpred | | -PLWLLDSSPEPASNVLQIERQILGSSLRSGELVLVWLTVVADR--NVPDALVVDL-LPA-GLELENQNLAVAAVVVNEGQPVTLVYLARAVTPGTYQLAQPQVES-YAPQW-----RATGASEGLLIVTP----------------------------------------- |
8 | 4acqA3 | 0.16 | 0.10 | 0.63 | 0.52 | DisCoVER | | --------------P-FFVELTMP-YSVIRGEAFTLKATVLNYL-PKCIRVSVQLE-AS-PAFLAVPVEKEQAPHCICANGRQTVSWAVTPKSLGNVNFTVSAEALEEVP-S--VPGRKDTVIKPLLVEP------------------------------------------ |
9 | 4acqA | 0.16 | 0.16 | 0.95 | 0.40 | MRFsearch | | --AGAFCLSEISSTASLRAFQPFFVYSVIRGEAFTLKATVLNYLPCIRVSVQLEAS----PAFLAVPVEKEQAPHCICANGRQTVSWAVTPKSLGNVNFTGLEKETTFNSLGGEVSEELSLARASVSVLGDILGSAMQNTQNLLQMPYGCGENMVLFAPNIYVLDYLNET-- |
10 | 4acqA3 | 0.17 | 0.12 | 0.69 | 0.79 | SPARKS-K | | --------------QPFFVELTMP-YSVIRGEAFTLKATVLNYLPKCI-RVSVQLEA--SPAFLAVPVEKEQAPHCICANGRQTVSWAVTPKSLG---NVNFTVSAEALESQELCGTEVPSVPEHGRKDTVIKPLLVEPE-------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|