>PF05749 (267 residues) GLQPRADMAAPPTLPQPPCAHGQHYGHHHHQLPFLGHDGHHGGTLRVGQHYRNASDVLPG HWLQGGWGCYNLSDWHQGTHVCHTKHMDFWCVEHDRPPPATPTPLTTAANSTTAATPATA PAPCHAGLNDSCGGFLSGCGPMRLRHGADTRCGRLICGLSTTAQYPPTRFGCAMRWGLPP WELVVLTARPEDGWTCRGVPAHPGARCPELVSPMGRATCSPASALWLATANALSLDHALA AFVLLVPWVLIFMVCRRACRRRGAAAA |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | GLQPRADMAAPPTLPQPPCAHGQHYGHHHHQLPFLGHDGHHGGTLRVGQHYRNASDVLPGHWLQGGWGCYNLSDWHQGTHVCHTKHMDFWCVEHDRPPPATPTPLTTAANSTTAATPATAPAPCHAGLNDSCGGFLSGCGPMRLRHGADTRCGRLICGLSTTAQYPPTRFGCAMRWGLPPWELVVLTARPEDGWTCRGVPAHPGARCPELVSPMGRATCSPASALWLATANALSLDHALAAFVLLVPWVLIFMVCRRACRRRGAAAA | |||||||||||||||||||
1 | 4adgA2 | 0.16 | 0.08 | 0.50 | 4.33 | HHpred | -------------------------------------------------------------------------DLEATGACICEIPTDVSCEGLGAWVPTAPCIWNGTQRAC----TFWAVNAYSSGGYAQLASYFNPGGSYYKQY--HPTACEVAFGHS-----------DAACWGFPTDTVMSVFALAS-----YVTPERPRLRLVDADDPLLRTAPGPGE-VWVTPV------------------------------------- | |||||||||||||
2 | 4adgA2 | 0.16 | 0.08 | 0.51 | 1.05 | MRFsearch | ---------------------------------------------------------------------------EATGACICEIPTDVSCEGLGAWVPTAP--CARIWNGTQRACTFWAVNAYSSGGYAQLASYFNPGGSYYKQYH--PTACEVEPA---------FGHSDAACWGFPTDTVMSVFAL-----ASYVTPERPRLRLVDADDPLLRTA-PGPGEVWVTP-------------------------------------- | |||||||||||||
3 | 4adgA2 | 0.08 | 0.04 | 0.55 | 0.96 | DisCoVER | ------------------------------DLEATGAC------ICEIPTD--V--SCGLGAWVPTAPCARI--------WNGTQRACTFWAVNAYSSGGYAQLASYFNPGGSYYKQY--HPTACEVE------PAFGHSDAACWGFPDTVMSVFALASYVTPER--PRLRLVDAAPGPGEVWVTPVIGSQAKCGLHIRAGPYGH-------------------------------------------------------------- | |||||||||||||
4 | 2d0vA | 0.05 | 0.04 | 0.69 | 0.67 | DEthreader | WPGNSGHESNTFAAYWPG------LII------KTQ----LDGHLVALAGEKGIQTLTQ--APYVAIVGSHVTRYAIGGTNWYALIYYGSGNPA------------P-WNETM---------------RPGDNKWTMTIGYQKT---PH-DEWDFAGNHPIADKLDD-----P-YGTKGISAMGHNGHDSYFFMGINHICMDWELWMYP--YLGLGFSVWVIGVGGPGVGLFLDPTAGLGAV------------------------- | |||||||||||||
5 | 4qdcA | 0.08 | 0.08 | 1.00 | 0.70 | CEthreader | TRFARGWHCLGLLRDFQDGKPHSIEAFGTKLVVFADSKGQLNVLDAYCRHMGGDLSRGEVKGDSIACPFHDWRWNGKGKCTDIPYARRVPPIAKTRAWTTLERNGQVWNDPQGNPPPEDVTIPEIAGYGTDEWTDWSVDNVVDMAHFFYIHYSFPRYFKNVFEGHTATQYMSGTNYDDPNAELRSEATYFGPSYMIDWLESDANGQTIETILINCHYPVSNNEFVLQYGAIVKKLPGVSDEIAAGMAEQFAEGVQLGFEQDVEIWKN | |||||||||||||
6 | 1n7dA | 0.07 | 0.06 | 0.85 | 0.55 | EigenThreader | EYDCKDMSDEVGCVNVTLCEGPNKFKCHSGECITLDKVCNMARDCRDWSDEPIKECGTNECECQDPDTCSQLCVNLEGGYKCQCEEGFQLDPHTKACKAVGSIAYLFFTNRHERLDRSELIPNLRNVVALSNRIYWSDLSQRMISSYDTVISRDIPDGLAVDWIHSNIYWTDSVLGTGSKPRAIVV----DPVHGFMYWTDWGTPAKIKKGGLNGVDIY----------SLVTENIQWP-------------------------NGI | |||||||||||||
7 | 4harA | 0.18 | 0.06 | 0.34 | 2.77 | HHpred | ------------------------------------------------------------------EACVTSWLWSEGEGAVFYR-VDLHFTNLGTPPLDEDGRWDPAL-------------------------MYNPCGPEPPAHVVRQPAGDVVWGKG-ERTYAEQ----DFRVGGTRWHRLLRMPV------------------------------------------------------------------------------ | |||||||||||||
8 | 4harA | 0.18 | 0.06 | 0.34 | 0.63 | MRFsearch | -------------------------------------------------------------------ACVTSWLWSEGEGAVFYR-VDLHFTNLGTPPLDEDGRWDPA-------------------------LMYNPCGPEPPAHVVRAPAGDVRGVWGKERTYAEQD----FRVGGTRWHRLLRM-------------------------------------------------------------------------------- | |||||||||||||
9 | 6lntD | 0.17 | 0.09 | 0.53 | 0.37 | FFAS-3D | ---------------------------------------------------------------------------------------------DRNDAGEAISFPTTLGMNKCYIQIMDLGHMCDATMSYECPMLDEGVEP----DDVDCWCN----TTSTWVVYGT----CHHKKG-----------EARRSRRAVTLPSHSTTRSQTWLESREYTKHLIRVENWIFRNPGFALAAAAIAWLLVIYLVMILLIAPAY--------- | |||||||||||||
10 | 4adgA2 | 0.15 | 0.09 | 0.59 | 0.95 | SPARKS-K | -------------------------------------------------------------------------DLEATGACICEIPTDVSCEGLGAWVPT--APCARIWNGTQRACTFWAVNAYSSGGYAQLASYFNPGGSYYKQYH--PTACE----VEPAFGHS-----DAACWGFPTDTVMSVFALASYV-----TPERPRLRLVDADDPLLRTAPGPGE-VWVTPVIGSQARKCGLHIRAGPYGHA----------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |