Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | MLTGVENSESGVIDLIKPGLDDVMKNETVQVTLVNSVLGWCKAHIVDPIKTSKIVQSRAFQITMVVLGVILLIAGLALTFVLQGQLGKNAFLFLIPAVIGLVKLLTTSVFMEKPCTPEKWRLCKRLLATTEDILDDGQINQSNTIF |
1 | 3r9mA | 0.07 | 0.07 | 0.92 | 1.00 | DEthreader | | -GVDTAEVHRSLKIAAFKLKLA-GRD---I--YIQCQAEAQEVTIARAIELKHAP-G-LIAALAYETANFYQKADHTLSS-LEPAYSAKWRKYLHLKMCFYTAYAYCYHGETLACAIRSLQEAEKLYAKAEALCK-EYGETKGPGP |
2 | 4q65A | 0.08 | 0.08 | 0.93 | 0.59 | DisCoVER | | AIYYVVALQIWEYFSFGMLLILYLTAYELFSAYCSLVYVTPILGGFLADKVL-GN--RM-AV-ML--GALLMAIGHVVLG-ASEIHP-SFLYLSLAIIVCGYGLFKSNVCLFTHTRGVVPTAMFQSGIYMLLSGAIANYLAGVAD- |
3 | 6es9A | 0.07 | 0.05 | 0.84 | 1.00 | DEthreader | | AGIEGATRDRAVTEELSGSTRARIQ---------------------IGMRYAVDRLIPADKLAMMAVEIMIARQLTYFSAWEKGRRCLEAGMAKLLGARVAWAAADNALQHGGNGEYAISRVLCDAR-ILNIF--EGAAEIQQVIA |
4 | 5zi1A1 | 0.11 | 0.10 | 0.91 | 0.56 | CEthreader | | ------GTAGGIIGLFTEVLRLLWPNKQNDLWESFMNEVEALIN-------QEITEAVVSKALSELEGLRNALEGYTSALEAWQKLKQLLVYERFVSTENLFKFAMPSFRSVGFEGTVYAQAANLHLFLLKNAELFGAEWGMQQYE |
5 | 5v6pA | 0.10 | 0.10 | 1.00 | 0.73 | EigenThreader | | LFGELRLIEHEHIFERLPFTIINTLFMSSLFGLLLLYLKVFHWILKDRLEALLQSIFSRFSFNLVLLAVVDYQIITRCISSIYTNQYLIQVMEFTMLLIDLLNLFLQTCLNFWEFYRSQQSYEKAIDVFTRFLKTALHLSMLIPFR |
6 | 6k4jA | 0.11 | 0.08 | 0.70 | 0.26 | HHpred | | --------------------------IFWLAGIAVLAIGWLRF---DSQTKSIFEQNYTGVYILIGAGALMMLVGFLGCC---GAVQESQCMLGFLLVIFAIEIAAAIWGYSH---KDEVIVQEFYKDTYNKLKTKD--------- |
7 | 4j05A | 0.12 | 0.10 | 0.78 | 0.37 | MRFsearch | | --------------QRWQEFVAYFSTWNHFRNLLGSMLGWFLVDIAFGKTGDVYDKLFQLATGNIIVTALGFLPGYYFTLFLIDIVGRKKLQFMGFIMSGLFLAILAGEIDH--IGKGPLLACFTFMQFF---------------- |
8 | 3o7pA1 | 0.12 | 0.10 | 0.82 | 0.68 | FFAS-3D | | ----------AVANNLNDILLPQFQQAFFQAGLIQSAFYF--GYFIIPIPAGILMKKLSYKAGIIT--GLFLYALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAAVTVLGPESSGHFRLNLAQTFASF------------- |
9 | 1c7dA1 | 0.11 | 0.10 | 0.87 | 0.63 | SPARKS-K | | ------MLSPADKTNVKAAWGKVGAHGEYGAEALERMFLSTKTYFFDLSHGSAQVKGHGKKVADALTNAVAALSALSDLHAHKLRVDPVNFKLLSHCLLVTLAAHL-----PAEFTPAVHASLDKFLASVSTVLTSKY-------- |
10 | 3rkoB | 0.10 | 0.08 | 0.86 | 0.65 | CNFpred | | ------------FREMVELAPAHFADGMLMWATLMLLGGAVGKSAQLPLTWLADAMAGPTPVSALIHAATMVTAGVYLIARTHGLFLMTPEVLHLVGIVGAVTLLLAGFAALVQTDIKRVLAYSTMSQIGYMFLALGV-------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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