>PF05744 (225 residues) DIDHCMPVFDMAYSDDNHLPYYIQRSTHHVVRDVDYTGFICYPLQVDLNDNVEVGADIYH MKIKTMRFNVDIYNNDVATKFPGWVRFIVFCTPPVSSWVNDGCSSLFSPFVGVNSFIDPK LLKRDGHGITVLHDGIYCLCHQEHFTRSFEFNFRGPGNYTLTSDVCWSPATNVDSIYVAC VASWCGDSAFMLQSDSVSWVHKRFWQRPVLEFGQCLDDLPDHDND |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 | | | | | | | | | | | | |||||||||||||
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Seq | DIDHCMPVFDMAYSDDNHLPYYIQRSTHHVVRDVDYTGFICYPLQVDLNDNVEVGADIYHMKIKTMRFNVDIYNNDVATKFPGWVRFIVFCTPPVSSWVNDGCSSLFSPFVGVNSFIDPKLLKRDGHGITVLHDGIYCLCHQEHFTRSFEFNFRGPGNYTLTSDVCWSPATNVDSIYVACVASWCGDSAFMLQSDSVSWVHKRFWQRPVLEFGQCLDDLPDHDND | |||||||||||||||||||
1 | 2bukA | 0.11 | 0.08 | 0.72 | 0.91 | DisCoVER | ---NTHLEHKRFA-------LINSGNTN-----A--TAGTVQNLSNG------IINQRSGDQVRIVSHKLHVRG--TAITVSQTFRFIWFRDNMNRGTTP-TVLEVLNTAN-FMSQYNPITLQQKRFTILKDVTLNCSLSIKDRIIQLVNYN------GATAVAASNGP---GAIFMLQIGDSLVGLWDS------------------SYEAV-YT--D------ | |||||||||||||
2 | 3isqA | 0.06 | 0.04 | 0.65 | 0.67 | DEthreader | AKPGRFHFHSVTFWVGNQA-FYCKMGF-----------------------QG----------------KIVFV---LSSALLGDGVKDIAFVEDYIQKARERG--------------AKIMREPWVKFAVLQGDTTHTLVKGQFL-M--HIVGNQPDEMASWYLQF-----EESIKMPGVQH-------ALKTLQIFTPVQD------LEVIQNFLFAFEELTNM | |||||||||||||
3 | 4nsxA | 0.08 | 0.08 | 1.00 | 0.54 | CEthreader | IKIPQSRISSLSFRTDGSSHLSVGTSSGDLIFYDLDRRSRIHVLKNIHRESYGGVTQATFLNGQPIIVTSGGDNSYLRSRGGHSQPPSYIAFADSQSHFMLSASKDRSLWSFSLRKDAQSQEMSQRSKFPEIVALAIENARIGEWENIITAHKDEKFARTWDMRNKWTFDTTDDGFVKSVAMSQCGNFGFIGSSNGSITIYNMQSGILRKKYKLHKRAVTGISLD | |||||||||||||
4 | 7ck6A | 0.02 | 0.02 | 0.73 | 0.73 | EigenThreader | LSPTEAFPVLVGDMDNSGSLNAQVIHQLRSKMAIQQSKNWQVDGEYRGS-DFTAAVTLGNPVGILVAHYLQSIT-----PCLALGGEYHRRP----------------------------------GEEGTVMSLAGKYTLNNWLATVTLGQ--------------------AGMHATYYHKASDQLQVGVEFEASTFGYQLDLPKANLLFKGSVDSNWRKNK-F | |||||||||||||
5 | 2bukA | 0.17 | 0.11 | 0.67 | 0.44 | HHpred | ---------------------AVKRMININGNTNATAGTVQNLSNGGDDINQRSGDQV---RIVSHKLHVRGTAI---T-VSQTFRFIWFRTPTVLEVLNTA---------NFMSQYNPITLQQ--KRFTILKDVTLNCSLTGES--IKDRII-----NLPGQLVNYNGATGPGAIFMLQIGDSLVGLW-DS--------SYEAVY------------------- | |||||||||||||
6 | 2bukA | 0.14 | 0.06 | 0.44 | 0.52 | MRFsearch | -------------------------------------------------------------RIVSHKLHVRGTAIT----VSQTFRFIWFRD-----------------------PTVLEVLNTAQKRFTILKDVTLNCSLRIINLPGQLVNYNGATAVAAS--------NGPGAIFMLQIGDWDSSYEAVYTDA------------------------------ | |||||||||||||
7 | 2bukA | 0.17 | 0.12 | 0.67 | 0.43 | FFAS-3D | ---------------------AVKRMINTSGNTNATAGTVQNLSNGIIQINQRSGDQVR---IVSHKLHVRGTAITVS----QTFRFIWFRDNM-----NRGTTPTVLEVANFMSQYNPITLQQKR--FTILKDVTLNCSLTGESIKDRIINLPG-------QLVNYNGATAVGAIFMLQIGDSLVGLWYEAV-------------------------------- | |||||||||||||
8 | 7a93A3 | 0.12 | 0.12 | 0.99 | 0.58 | SPARKS-K | PPAYTNSFTRGVYYPDKVFRLFLPFFSNVTWFHAIHVTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGLLIVNN--ATNVVIKVCEFQFCDPFLGVYYNKSWMESEFRVYFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPIPQGFSALEPLVDLPIGINITRFQTLHRWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKC | |||||||||||||
9 | 4a0pA | 0.12 | 0.08 | 0.65 | 0.91 | CNFpred | --------YDLSIDIYSRYIYWTCEA-----------TNVINVTRLD---GRSVGVVLKGEQDRPRAVVVNPE--------KGYMYFTNLQEPKIERAALDGT---REVLFF-------GLS--KPIALALDSGKLFWADSD--LRRIESSDLSGANRIVLE---------NILQPVGLTVFE---NWLYWIDKQMIEKIDM----------------------- | |||||||||||||
10 | 1kfuL | 0.10 | 0.08 | 0.76 | 0.83 | DEthreader | LDRAAGGEGLTPTLTS-DTYKKWKLTKMDGNWRRGTAGNPQYLIKLEEEDEDEE--D--GESGCTFLVGLIQKHRRRQREDMHTIGFGIYEVPE-ELSGQTNIH-LSKNF------FL-TNR------ARERSDTFINL-----REVLNRFKL----PP--------------GEYILVPSTEPNKDGDFCIRVFSEKK------------YQAVDDMPLHIRFC | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |