Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200 220
| | | | | | | | | | | |
| Seq | VVPVVGLADDDVEQWRRALDSFLVHGKTADTIRKLSRLFKGDGHYGLLASLVIMQSAFGHSSKFRHKLSVMEVIQFSDKTAVTLYRKLKDHKHETGIEQVFWDCKQRLALLLENECGCVDCQRLASVLQRDRGVMRPPNLNPHQKHSQAATFLTWIYNQAVLNLNVAVLEDQIEVLFIKPDEFFDFAPDMRDELSLLTSCLHFCWLHFILKHYVHLELDVIQEHI |
1 | 2r2iA | 0.10 | 0.07 | 0.67 | 0.65 | DisCoVER | | -GNVELSA---T-ECHQWY-------------KKFMTECPSGQLTLFKQFFG-LK-NL--------SPSANKYVEQMFETF---DFN-KDGYIDFEYVAALS-LV----------------------L--KDQKLRWYFKLYDVGCIDRGELLNIIK--A-----IRARCEFTNMVFIDINGGELSLEEFMEGVLLDILTRSLD--LTHIVKLI--QN--D---- |
2 | 4av3A | 0.07 | 0.05 | 0.78 | 0.83 | DEthreader | | -----------LG-AA--FA--VSSIRGADFLAHETKAIFVAAGIIAMFDRVGGGVYTKADMDD--D-GDV-GLADLLESFVGAIVSSII----------------YPIFFALV------GLGCSMLGILYVILISLWTALVV--FIIGIFSGILIGFWAEYTSGSV---TLTLVLGILF--ADYFAGYGVAIAALGMLSF-VATSVSVDSYGPIADNAGGISEM |
3 | 7kdtA | 0.06 | 0.05 | 0.93 | 0.57 | CEthreader | | FNMAADIDPQNADVYHHRGQLKILLDQVEEAVADFDECIRLRPELAQAQKCFALYRQAYTGNNSSQIQAAMKGFEEVIKKFPRCAEGYALYAQALTDQQQFGKADEMYDKCIDLEPDNATTYVHKGLLQLQWKQD-------------LDRGLELISKAIEIDNKCDFAYETMGTIEVQRGNMEKAIDMFNKAINLAKSEMEMAHLYSLCDAAHAQTEVAKK--- |
4 | 3msvA | 0.10 | 0.09 | 0.87 | 0.63 | EigenThreader | | TEDISTLPKDFHAAYSSALLAVSELSYIDAAIERAQLGLPGNESRLFLALARAYLEKVRVLVWRHDNEETQLVNPYIEKAIQYLRPLAQDSTEYFDACSIITALWLKSAEYYMDLLDNSKASSWLNNSVDTWNVIYTLDKSPERLLKLADIKMDLAQIV----QDEASQDNYLKEACNAIKEAQGSGVEDYVEFVEAYS-------------------------- |
5 | 2pffB | 0.15 | 0.14 | 0.92 | 0.36 | HHpred | | -VFTQGLNILENTPDKDQLAHYVVTAKLLGFTPGELRSYL-KGATGHSQGLVTAVAIAETDSWESFFVSVRKAITVLFFIGVRCYEAYPN---TSLPPSILEDSLENNEPMLSISNLVQDYVNKTNSHLPAGKQVEISLVNGAKNLVVPPQSLY-GLNLTLRKAKAPSGLDQSRIPFSRKLKFSFLSPFHSHLLVPASDLIN--------KDLVKNNVSF----- |
6 | 5i9dA | 0.11 | 0.09 | 0.88 | 0.42 | MRFsearch | | --------APTVVTYNTLIDGLCKAGKLDEALKLFEEMVEIKPDVVTYNTLIDGLCKA---GKLDEALKLFEEMVEKLDEALKLFEEMVEKGIKPDVVTYLDEALKLFEEMVEKGPDVVTYSTLIDGLCKAG------------KLDEALKLFEEMVEKG-----IKPNVVTYSTLIDGLCKAGKLKPNVVTYNTLIDGLCKAGTYNTLIDGLCKEALKLFEEMV |
7 | 4p1nA | 0.11 | 0.08 | 0.76 | 0.75 | FFAS-3D | | ---------ESLSAKAFVMYSF-----AEMKFSQILNLIPAPELKKLCMESLLLYLK------------SLTILASSMKLTSKWWYENESKNCTLKLNILVQWIRDRFNECLD------KAEFLRLKLHTLNQSEDPQ--VLDDPTIFVEKL---IYDRAL-----DISRNAARLEMEG---------NYNTCELAYATSLWM--LEILLKEMIRKYVSSIANRL |
8 | 6w2rA | 0.09 | 0.08 | 0.87 | 0.60 | SPARKS-K | | -----GTTEDERRELEKVARKAIEAAEVREQLQRALEIARESGTLALDVALRVAQEAAKRGNK--------DAIDEAAEVVVRIAEES----NNSDALEQALRVLEEIAKAVLKSEKTEDAKKAVKLVQEAYKAQRAIEAAKRTGTPDVIKLAIKLAKLAARAARPKSVNEALKKIVKAIQEAVESLREAEES------------KREKARERVREAVERAEEV- |
9 | 4c0oA | 0.10 | 0.08 | 0.87 | 0.78 | CNFpred | | -----------CRCLRFAVRCVGKAALLQPLVTQMVNVYHVHQHSCFLYLGSILVDEYGME---GCRQGLLDMLQALCIPTFQLLEQQGLQNHPDTVDDLFRLATRFIQRSPVTLLRSQVVIPILQWAIAS------TTLDHRDANCSVMRFLRDLIHTGVAN-DFELRKELIGQVMNQ---------LGQQLVSQLLHTCTLPDVAEVLWEIMQVDRPTFCRWL |
10 | 5mpbZ | 0.11 | 0.08 | 0.80 | 0.83 | DEthreader | | -----GEEDAVDLLLEIESIDKLPFVDENTFQRVCQYMVACVPDVFLKAYSIYDAIVFTAYILAAQKTSFEYE-QGT-YMGQGSCAYTGDVLLDEEKEAGIVDELAYAVLGIALAL----L------M---EHIRRVPMGIVSVDPQMKVFDTLTRFSHDADLFITRMTMDVFNDAHVLNKV-------------------------GGQRPKNHGERAELETDE |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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