Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | TTRKKVKVTGTETYINQSTGEIKEMQVIDIEERDFNFHKVWLEHIIHSMDLIGNQKTRLAFWLINNLNRDNVLIMTQRKIAEKTGISLETVRQTMKALMESGFLIKINSGAYCVNPDAVFKGGKTDRLNVLIQYRKSEQENTKTSEPTSEKDEPSLFNNEQLK |
1 | 4ev0A2 | 0.21 | 0.10 | 0.46 | 0.49 | DisCoVER | | --------------------------------------------------SFEEARNRVAYALLKLLGLGPLFQIRHHELAALAGTSRETVSRVLHALAEEGVVRL-GPGTVEVR--EA-------------------------------ALLEEIA---FG- |
2 | 6j5tG | 0.10 | 0.08 | 0.77 | 0.83 | DEthreader | | ----KRTLRTLAD----------------NSETDNV--MSSLQLSYD--ELPSH-LKSCILTLSL-YPEDCVIPKQLVHGWIGEGVATESGEDCFSGLTNRCLIEVVDIITCKIHDMVRD-----LVIDIAKKDSF-SN--GLNCLGISIVLRGYLRHAN--- |
3 | 2xubA | 0.10 | 0.10 | 1.00 | 0.54 | CEthreader | | TMDYAEVSNTFVRLADTHFVQRCPSVDGIYWQANLDHQHFRDQAIVSAVANRMQTSSEIVRTMLRMSEAPFTQPLSSNEIFRSLPISKQVLDQYLTLLADLEFVGKSGGGMYVINLHKALASLATATLESVVQERFGSRCARIFRLVLQKEQKQVEDFAMIPA |
4 | 5w1eA | 0.09 | 0.09 | 0.98 | 0.78 | EigenThreader | | IEPGLVAV--SVPVRDPGTGRVACVASVVSHTSRHTMEDDLRAASKQELGREFVESLARGLTVLTAFGEGRSALT-LTQVAQATGLARATARRALLTHARAGLVAPAAGHTFTLTPRVLSLGFPPLSLHADDCVAQILPELRHTADLVETELRVAGRFCRVAV |
5 | 1zybA | 0.09 | 0.06 | 0.58 | 1.01 | HHpred | | -----------------------EVHTVCISFRYDIFRLNY-NIVSNRAQNTLDLKSKIIRFFLSHCEKPGTFKVK-DDLARCLDDTRLNISKTLNELQDNGLIELHRKEILIPDAQKLL------------------------------------------- |
6 | 4ev0A | 0.14 | 0.10 | 0.73 | 0.42 | MRFsearch | | --ALYLVASGKVRLFRTHGGQERTLALLLALFREPLVAHNLAALLARRLREAEEARNRVAYALLKLLRQGPLFQIRHHELAALAGTSRETVSRVLHALAEEGVVRLGPGTVEVREAALLEE------------------------------------------ |
7 | 2oz6A | 0.19 | 0.13 | 0.69 | 0.82 | FFAS-3D | | ----TILIEGREMIIGYLSGDFFECEVAEISYAKFTLGSQMADRLRKTTRKVLDVTGRVARTLLDLCQQPDAIKITRQEIGRIVGCSREMVGRVLKSLEEQGLVHVKGKTMVVFGT----------------------------------------------- |
8 | 2h09A | 0.11 | 0.08 | 0.74 | 0.79 | SPARKS-K | | -----------------------------------------EGFRQVREAHRRELIDDYVELISDLIREVG--EARQVDMAARLGVSQPTVAKMLKRLATMGLIEMIPWRGVFLTAEGEKLAQERERHQIVENFLLVLGVSPEIARRDAEGMEHHVSEETLDA |
9 | 5cvrA | 0.20 | 0.12 | 0.59 | 0.74 | CNFpred | | -----------------------TSMVCEIPY-MPKLRQQIMRLMSNEIKGD-NAEERLAAFLYNLSTRFFRLTMTRGDIGNYLGLTVETISRLLGRFQKTEMLTVKGKYITINDHDALAE------------------------------------------ |
10 | 6sj9A | 0.09 | 0.07 | 0.79 | 0.83 | DEthreader | | RDVLIRIGKDS---------------NRL-------LT-AES-VL-LAA-LTEDQLAR-LQLVPFLVH--HQGLH-IQEVADHFGISRKALIDDLKILICSLLDIQWENDHVYISEH--LNRPVRFVIKLTGAAGAARLAGSGQSVAQAFAAIAIREGR--G- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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