Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | IKNNDGESTISGKAITLPTPMIFPPPLFIRFIQYKTDGKLWSNENFEINSGKVECNGEDYELVQSRCITQKIDDDSENVMDI |
1 | 4gklA2 | 0.04 | 0.04 | 0.94 | 0.57 | DisCoVER | | MIFIRNDQPERVISYLWRHG----NRFILCVLNPLTSVTLDFSGIWENICIHSKNVFDIVRVSVKNSRAKIKVGREPLILS- |
2 | 7br2A2 | 0.06 | 0.06 | 0.94 | 0.83 | DEthreader | | SFIMVYKAKDVAGCTISNIKKIGDISFDYLAEALPY----PLDTAIFMETLLLLIDQEIGINL-AAESYQQATINKPVVRKI |
3 | 5vtgA | 0.04 | 0.04 | 1.00 | 0.54 | CEthreader | | VRIDAFGLKARLTGDLNVVQDKQGLGLNGQINIPEGRFHAYGQDIVRKGELLFSGPPDQPYLNIEAIRNPDATEDDVIAGVR |
4 | 6xgrA1 | 0.06 | 0.06 | 1.00 | 0.62 | EigenThreader | | RKTGEMFGNTPEFTTDSETLDHGMREASQGGTFTCDNILALWFLVYGALRMISDNVGLNKNYYFPKVSIAPDKGDSFTFKAM |
5 | 6ekvA3 | 0.15 | 0.11 | 0.73 | 0.28 | HHpred | | ----------------IKKDNLYPKDFKAVYSRFTATGDSWENIKCPIKSAAYDLDGDVFNSSTNFLLIQYFDSKT------ |
6 | 2ce6A | 0.16 | 0.13 | 0.83 | 0.58 | MRFsearch | | --GRDNTRELAK-NITFASPYCRPPVVLLSITQLDVE--QSQNLRVIARLYSVSPTGFKASCYSMSISWISIE--------- |
7 | 5wecA | 0.13 | 0.12 | 0.91 | 0.34 | FFAS-3D | | VSLADAPATVIAKQNFITNGMQVPLEFNLAYDSRKIK----ASHRYSV-SARIEVDGKLRFITDTHYGVITDPEATKHVP-- |
8 | 2mywA | 0.11 | 0.10 | 0.88 | 0.69 | SPARKS-K | | ----------SGRENLYFQGHMAAPARFCVYYDGHLPATRVLLMYVRITTATITARGHEFEVENCKVILTNGKQAPDWLAAE |
9 | 5vtgA | 0.13 | 0.09 | 0.66 | 0.69 | CNFpred | | --------------------------KARLTGDLNVVQDLGLNGQINIPEGRFHAYGQDLIVRKGELLFSGPP--DQPYLNI |
10 | 5urw11 | 0.07 | 0.06 | 0.93 | 1.00 | DEthreader | | A-----SDIKGIECAYSQKVFTRQYEGIEITKIDSS-PLLMKLCNQVIDATFKFFRFYTVSIKKARINAIQQTVPMETLQLV |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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