>PF05704 (278 residues) KSLEIVRLNNSNVVLSRLRRKYKQTIKNLEREKQYSLSYNQRHNETSNKIWICWFQGLDA APHVVQECIASVKKHLADREVVVLTDDNYHHYVTFPDYIKEKATQGFISKAHFADLLRLE LLTKYGGTWIDGTVFCSSSDIPAYMLDSDLFLFQNLKPGLDGQALAISNWFITASYSNHP LLNMTKDLLYDYWKNHNGVVDYFIFHHFFQLAIEEFPEYWSKVVPFNNSTPHILQLRLFE EFDEVMYGYILEQTPFHKLTYKFEEEKSRIPNTYYKHL |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | | |||||||||||||
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Seq | KSLEIVRLNNSNVVLSRLRRKYKQTIKNLEREKQYSLSYNQRHNETSNKIWICWFQGLDAAPHVVQECIASVKKHLADREVVVLTDDNYHHYVTFPDYIKEKATQGFISKAHFADLLRLELLTKYGGTWIDGTVFCSSSDIPAYMLDSDLFLFQNLKPGLDGQALAISNWFITASYSNHPLLNMTKDLLYDYWKNHNGVVDYFIFHHFFQLAIEEFPEYWSKVVPFNNSTPHILQLRLFEEFDEVMYGYILEQTPFHKLTYKFEEEKSRIPNTYYKHL | |||||||||||||||||||
1 | 6bsuA | 0.08 | 0.06 | 0.81 | 1.00 | DEthreader | ----------------------------K--IS-DWDEQRRLPNFVRVLLVTGSAPKPCPGDHYLLKSIKNKIDYCRGIEIFYNMA--LL---------D--AE---MAGFW-AKLPLIRKLLLHILWWMDSDAMFDMVFELPWEYKYNLVMHGWNEMVDQKNWIGLNTGSFLLRN-SQW-SLDLLDAWAPMGPKIREEADDSAMVYLLATEREKWGGKV--YLESGYYLHGYWGILVDRYEEMIENHKPGFGDPLVTHFCPPVERCLRQMDRAFNFG | |||||||||||||
2 | 6bsuA | 0.07 | 0.06 | 0.82 | 1.00 | DEthreader | --------------------P---S---K--ISDWDEQRRLPNFVPRVLLVTGSAPKPCPGDHYLLKSIKNKIDYCRGIEIFYNMA--LL--------DA-E-----MAGFWAKLPLIRKLLLSHILWWMDSDAMFDMVFELPWERYKYNLVMHGWNEMVDQKNIGLNTGSFLLRN-SQW-SLDLLDAWAPMGPKIREEADDSAMVYLLATEREKWGGKV--YLESGYYLHGYWGILV--DRYEEMIHKPFGDPLVTHFVCKPVERCLRQMDRAFNFG | |||||||||||||
3 | 4mixA | 0.18 | 0.14 | 0.79 | 2.11 | HHpred | -----------DDIRKYIARKS--AIKIFNQSIN-YSATKWPPEPIDKNIH-IWIGT-KNISEKNIKLSIDTAKKNPDYNTSIIYDSGIKKFLELKAYYEQVIA-E-NKYAQASDILRLLVLKYEGGIYKDIDDIQVKG-FGS-LTFPKGIGV--R------EYTAFPNTPIA-VTKNNPIINKTLDLAVSNYQRGEKNVLKLAPDVFTQALYQEIPGLDSKVL---NAQLYQLRQALGVPLEQLTSAEKE--------------------------- | |||||||||||||
4 | 4mixA | 0.14 | 0.09 | 0.65 | 1.09 | DisCoVER | -----------------------------------YSATKWPPEPIDKNIHIWIGTKN--ISEKNIKLSIDTAKKNPDYNTSIIYISGHEGFLPSFAYYEQVIAE--NKYAQASDILRLLVLKYEGGIYKDIDDIQVKG-FGS-LTFPKGIGVR--------EYTAFPNTPIAVTKN-NPIINKTLDLAVSNYQRGENVLKL-AGPDVFTQALYQEIPGLRPYSIRGL--S----------------------GYV-E-------------------- | |||||||||||||
5 | 4mixA | 0.18 | 0.14 | 0.78 | 0.77 | MRFsearch | --------IRKYIARKSAIKIFNQSINY--------SATKWPPEPIDKNIHIWIG--TKNISEKNIKLSIDTAKKNPDYNTSIIYDSGNVNIIDSFAYYEQVIAE--NKYAQASDILRLLVLKYEGGIYKDIDDIQVK-GFGSLTF-PKGIGVREY--------TAFPNTPIAVT-KNNPIINKTLDLAVSNYQRGENVLKLAGPDVFTQALYQEIPGLDSK-----VLNAQLYQLELAKEKINRPYQSIRG-------------------------- | |||||||||||||
6 | 4mixA | 0.16 | 0.13 | 0.83 | 1.15 | SPARKS-K | ----------------DDIRKYIARKSAIKIFNQSINYSATKWPPIDKNIHI--WIGTKNISEKNIKLSIDTAKKNPDYNTSIIYDSGAKKFEPSFAYYEQVIAEN--KYAQASDILRLLVLKYEGGIYKDIDDIQVKG-FGSL--TFPKGIGVREYT-------AFPNTPI-AVTKNNPIINKTLDLAVSNYQREKNVLKLAGPDVFTQALYQEIPGLSKVLNAQLYQLELAKRQALGVPLEKEKINRPYQSIRGLSGYVEN--------------- | |||||||||||||
7 | 2vk9A | 0.14 | 0.12 | 0.85 | 1.21 | MAPalign | ---VKEIYSKLSKLNELVDNYQDSLYSELRELIKNSR----TSTIASKNLSFIWIGGP--ISDQSLEYYNMWKMFNKDYNIRLFYVNDIENILTLKSYYYQELIQTNN-LAAASDILRIAILKKYGGVYCDLDFLPGLILPLGDIISQEILLSRLKA---ATGKKTFSNAFII-SNNDSLTLNNLISQLENRYEIPEVNSTVFFSPNIYSSATCDTSQNQEIF-EA-------------------------SNNLYFSKTHDEFKSSWLLRSNIAEK- | |||||||||||||
8 | 2vk9A | 0.13 | 0.13 | 0.98 | 0.97 | CEthreader | KLNELVDNYQTKYPSSGRNLALENFRDSLYSELRELIKNSRTSTIASKNLSFIWIGG--PISDQSLEYYNMWKMFNKDYNIRLFYDKDINTENILTNKLKSYYYQQTNNLAAASDILRIAILKKYGGVYCDLDFLPGVNLLGDIKISQLEILLSRLKAATGKKT---FSNAFIISNNDSLTLNNLISQLENRYEILNSIIQEKFKICETYDSYINSVSELVLETTPKNLSMDGSSFYQQIGYLSNSTVFFSGPNIYSSATCDTYHFIKNTFDMLSSQN | |||||||||||||
9 | 4mixA | 0.16 | 0.14 | 0.85 | 0.95 | MUSTER | ------DDIRKYIARKSAIKIFNQSINYSATKW--------PPEPIDKNIHI-WIGT-KNISEKNIKLSIDTAKKNPDYNTSIIYDKKFLEKFQDSAYYEQVIAENK--YAQASDILRLLVLKYEGGIYKDIDDIQVKGF--GSLTFPKGIGV--------REYTAFPNTPIAV-TKNNPIINKTLDLAVSNYQRGEKNVLKLAPDVFTQALYQEIPGLDSKVLNAQ-QLELAKRQALGVPLTSAEKEKINR--PYQSIRGLSGYVEN---------- | |||||||||||||
10 | 4mixA | 0.13 | 0.11 | 0.82 | 4.05 | HHsearch | -----------DDIRKYIARKSFNQSINYSAT-------KWPPEPIDKNIH-IWIGT-KNISEKNIKLSIDTAKKNPDYNTSIIYDSGISKFLEIFAYYEQVIAE--NKYAQASDILRLLVLKYEGGIYKDIDDIQVKG-FGS-LTFPKGIGV--R------EYTAFPNTPIA-VTKNNPIINKTLDLAVSNYQRGEKNGPDVFTQALYQEIPGLDSKVLNA-------QLYQLRQALGVPLEQLTSAEKEKINRPYQSIRGLSGYVEN--------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |