>PF05703 (270 residues) PETPREPMEFLSRSWSVSALEVSKALSPAPNHTTITIQENTAEDTAAVSLNPFSFASSET SQMVMERIMSQSQEEASPRTSGRLSHSSGPLTDTSPVSPSEIDDIKYGRSNNATSANLNG YFKPPGGGGKTVGRWLKDRKEKKKEEARAHNAELHAAISVAAVAAAVAAIAAATAASSGS GKDEQVAKTDSAVASAATLVAAQCVEAAEALGAEREHLAAVVSSAVNVRSAGDITTLTAA AATALRGAATLKARALKEVWNIAAVIPVER |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | | |||||||||||||
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Seq | PETPREPMEFLSRSWSVSALEVSKALSPAPNHTTITIQENTAEDTAAVSLNPFSFASSETSQMVMERIMSQSQEEASPRTSGRLSHSSGPLTDTSPVSPSEIDDIKYGRSNNATSANLNGYFKPPGGGGKTVGRWLKDRKEKKKEEARAHNAELHAAISVAAVAAAVAAIAAATAASSGSGKDEQVAKTDSAVASAATLVAAQCVEAAEALGAEREHLAAVVSSAVNVRSAGDITTLTAAAATALRGAATLKARALKEVWNIAAVIPVER | |||||||||||||||||||
1 | 5zvs21 | 0.11 | 0.09 | 0.76 | 0.67 | DisCoVER | QQLSLALAGELLDHIPFATP-VV--VPPS-------I--YHSLDWSKCFAVNERIPTIDDDV-YV--PNSDIGIEAAERARCAST-----------FYK----IASSQARQVKLDPIRM---------LGFLLLVQ----------ARPRVPRRPTLSP-ALHAIWQVMQYA--PALVVSGAIWWIP-RNVVSVQYLLTDLISLAILAHMTDMSPTLELTGVLMYLASSHSY-AYTLTSGMY--------L---VNRHPPVGKEYAAPQ- | |||||||||||||
2 | 3a47A | 0.06 | 0.04 | 0.73 | 0.67 | DEthreader | ----------FKKYIADAIWISPFYGVWPTYGDCLITD-CSSEQPDLNWRIYVFRIDVGSLLNMQHA--SDETKRLYT-RHELSEL----YINGTDCW------STIYLENQ-SRFGDDSPKNRV--GK-LLSVLLSA----------VYQGQELGQI-NF--WKYEDVEIRNNYNAIEHGENSEEMKKFLEAIALISRDHARTPMQWNAGFSGAKPWFY-N------------------------VLNFWKEALFRKTVGYF------- | |||||||||||||
3 | 1kq3A | 0.09 | 0.09 | 1.00 | 0.54 | CEthreader | PGRYVQGAGAINILEEELSRFGERAFDFVDKNVLGENFFSSFTKVRVNKQIFGGECSDEEIERLSGLVEEETDVVVGIGTAKAVAYKLKKPVVIVPTIASTDAPCSALSVIYTPNGEFKRYLFLPRNPDVVLATWFEAESCKQKYAPNMTGRLGSMTAYALARLCYETLLEYGVLAKRS-VEEKSVTPALEKIVEANTLLSGLGFESGGLAAAHAIHNGLTVLENTHKYLHGEKVAIGVLASLFLTDKPRKMIEEVYSFCEEVGLPTTLA | |||||||||||||
4 | 6btmC | 0.07 | 0.07 | 0.97 | 0.67 | EigenThreader | VEGPANKQWWIVFTIALVAFLWGLGTGIGTWGLNKVWWVGIGHAGTLISAVLLLFRQRWRMAISAEAMTIFSVVQAGLFPIIHMGRPNQFGSLWVNFNSWWTGLLPDFAMLRDRAITVYSILSFGWSGRLATPLVLSVHTIVSMDFATPPYFVAGAVFSGFAMVNTLLIVMRKVS--NLEAYIT------LQHIELMNIIIMITGSIVGAYWSMMTCNVFSPQFMWFRTSIMFSFIISIVVNIGMWFERFVIIVTSAEVKTILKGTGDNY | |||||||||||||
5 | 5u5gA2 | 0.22 | 0.06 | 0.27 | 0.25 | HHpred | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AQRLKINNLAESINLAGAIEVISQGLSQGLDLKSMADVFTSCRG-RSA--YMDVALG--YALSGNVSLGV-RCKDLEL--------- | |||||||||||||
6 | 5yfpC4 | 0.09 | 0.05 | 0.53 | 0.48 | MRFsearch | ----KPYQEIFSKTWYMGS----------------------------------------QAQQIADTL----------------------------------------------------------------DEYLLDIKPQM---NSVLFVNFIDNVIGETIIKFLTALSFEHS------FKNKNNKFLEAMKRDFEIFYQVMEFFMDLSCEPIDSILDIWQKYLEVSRIDLLVGILSSERKKIVQQATEMLHEYRRNM---------- | |||||||||||||
7 | 5a9q4 | 0.14 | 0.13 | 0.96 | 0.50 | FFAS-3D | -----WLLQQEMVTWRLLASLYRDRIQSAEEESVVTAVNASEKTEALFQRDS----LVRQSQLVVDWLESIAKDEIGIEYAKSVYDPDAPIRQKMPLDDLDREDFTLIRAGMHDPNVNGGTELEPVEGNPYRRIWKISCWRMAEDELRYERA-IYAALSWAYFRVMVDSLVEQEIQTSVAPRLGANWTLEKVFEELQATDLYHIVQKFLILGDIDGLMDEFSKWLSRNNLPGHLLRFMTHLILFFRSIEVLKTYIQLIREKHTNLIAF-- | |||||||||||||
8 | 6w2wA | 0.12 | 0.10 | 0.80 | 0.78 | SPARKS-K | --------------SEEVNERVKQLAEKAKEATD---KEEVIEIVKELAELAKQSTDPNVVAEIVYQLAEVAEH----------------STD--PELIKEILQEALRLAEEQGDEELAEAARLALKAARLLEEARQLLSKDPENE------AAKECLKAVRAALEAALLALLLLAKH---PGSQAAQDAVQLATAALRAVEAACQLAKQYP-NSDIAKKCIKAASEAEEASKAAEEAQRARDEIKEASQKAEEVKERCERA-------- | |||||||||||||
9 | 3um3A | 0.17 | 0.10 | 0.60 | 0.62 | CNFpred | -------FELISMGFNLWYTKYASRLAGKENITEDEAKEV--------------HRSLKIAAGIFKHLKES--------HLPKLITPAEKGRDL--------------------------------------------------------ESRLIEAYVIQCQAEAQEVTIARAIELKH---------APGLIAALAYETANFYQKADHTLSSLEPAYSAKWRKYLHL-----KMCFYTAYAYCYHGETLLAIRSLQEAEKL-------- | |||||||||||||
10 | 6r9tA | 0.06 | 0.04 | 0.73 | 0.83 | DEthreader | ---D--DAGSGRPLLAELLQQGESDTDFQALQLA------------------------------PAGRYD-Q-TDTIATSDLVNIAKIAAANAKKVLELVQGAAAEMDALSVDKASSLEEQRLAV--ARQENEEIGSHIKVALQAGTQACITAASAVSGIIADL-DTTIMFATAG-------AEDPETQVVLINAVKDVAKALGDLISATKA--VEPPAKTADR--QWGLSARMVAATN--ASQEK---------------------AAA | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |