>PF05701 (567 residues) KGLIDTAAPFESVKEAVSKFGGIVDWKAHRMQTVERRKLVEQDLEKVQDEMPEYKQRSED AEEAKMQVLKELDSTKRLIEELKLSLERAQTEENQAKQDSELAKLRVEEMEQGIADEASV AAKTQLEVAKARHAAAVSELKSVKEELEALQKEYTSLMTERDVAVKKAEEAVSASKEVEK TVEELTIELIATKESLESAHAAHLEAEEKRIGAAMARDQDTHHWEKELKQAEEELQKLNQ QIHSAKELKLKLDTASALLLDLKAELAAYMESKLKEQTDGHSTDESQASERRTHTDIQAA IASAKKELEEVKLNIEKATTEVDCLKVAAISLKSEVEKEKSALTAIKQREGMASVAVASL EAELDRTRSEIAMVQMKEKEAREKMLELPKQLQQAAQEADEAKSLAQMAREELRKAKEEA EQAKAGASTMESRLLAAQKEIEAAKASEKLALAAIKALQESESAQSTNNVDSPAGVTLSL EEYYELSKRAHEAEEQANMRVAAAISQIEVAKQSESRSLEKLEEVNREMANRREALKIAM EKAEKAKEGKLGVEQELRKWRAEHEQR |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520 540 560 | | | | | | | | | | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | KGLIDTAAPFESVKEAVSKFGGIVDWKAHRMQTVERRKLVEQDLEKVQDEMPEYKQRSEDAEEAKMQVLKELDSTKRLIEELKLSLERAQTEENQAKQDSELAKLRVEEMEQGIADEASVAAKTQLEVAKARHAAAVSELKSVKEELEALQKEYTSLMTERDVAVKKAEEAVSASKEVEKTVEELTIELIATKESLESAHAAHLEAEEKRIGAAMARDQDTHHWEKELKQAEEELQKLNQQIHSAKELKLKLDTASALLLDLKAELAAYMESKLKEQTDGHSTDESQASERRTHTDIQAAIASAKKELEEVKLNIEKATTEVDCLKVAAISLKSEVEKEKSALTAIKQREGMASVAVASLEAELDRTRSEIAMVQMKEKEAREKMLELPKQLQQAAQEADEAKSLAQMAREELRKAKEEAEQAKAGASTMESRLLAAQKEIEAAKASEKLALAAIKALQESESAQSTNNVDSPAGVTLSLEEYYELSKRAHEAEEQANMRVAAAISQIEVAKQSESRSLEKLEEVNREMANRREALKIAMEKAEKAKEGKLGVEQELRKWRAEHEQR | |||||||||||||||||||
1 | 5xg2A | 0.13 | 0.05 | 0.38 | 1.12 | EigenThreader | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TKGAIVRWGKRKEKLIEEIRAREEERNALVVRLGEIDRTFAVAREEFDTVVKELEEARKSLYEGEARIKRAEEEKERLKAEILTGEARLPGLRERAENLRRLVEEKRAEISELERRLSSITSQSFELRIKLSDLEKELELARKDLEKVLAEERAVREEIEVAKRRINELDTLIERERGELAKLRGRIERLERKRDKLKKALRELTEKIRAVEKEI | |||||||||||||
2 | 6z9lA | 0.15 | 0.14 | 0.92 | 3.28 | FFAS-3D | -----------AITEK-----------------QQQVTEKQAIVDQKQQVADTAKKEKDAIDQSVKDQQAVVDQNKDALDQSQQAVTDQQAVVDEAKKAIEKAKEQVATDTQAVDEQQKDQAQTDVNQQQAVVDEKAKETNAAKVQNEKDQQAVTAAKQEQAKLEELAKNAEAEKVKAEKEQAAKEAELANKQKEEAKAKDQKTKDDQAVADQQTVVTTSQEKVTDAKADTAAKQADLTAKENALKDKQAATKQAQNTLDNSKEEIATLEKTALEMNKNFPTSKEDEKDVRKKKEELQQEIASNQEKLATAQQAESDAQQARSASQQALNTAKTTQATAEKELSVHKATLANLQAVATKSTTNYEEKVRQTATAEKSLQQTKDQLATINELIQNRAAVLEKAKTNVAEAQAIEQTSAKVLKEKQEAQKAEENTLNSLKEVLDLAKENLNQKQVALKTSTRSLSR---------------LENAQPTYEKALNELNKAEAAVVQAQEAYENSMKSLEELKEQQAVATLAYAQAQEDLSNAKLELQQYQGVLRDLEAQQAEQRRQEALQ | |||||||||||||
3 | 6yvuB | 0.12 | 0.12 | 1.00 | 1.78 | SPARKS-K | KDLEDEKMKFQESLKKVDEIKAQRKEKDRISSCSSKEKTLVLERRELEGTRVSLEERTKNLVSKMEKAEKTLKSTKHSISEAENMLEELRGQQTEHETEIKDLTQLLEKERSILDDIKLKNISAEIIRHEKELEPWDLQLQEKESQIQLAESELSLLEETQAKLKKNVETLEEKILAKKTHKQELQDLILDLKKKLNSLKDERSQGEKNFTSAHLKLKEMQKVLNAHRQRAMEARSSLSKAQNKSKVLTALSRLQKSFDVAISTACPRLDAQHCIDYLRKNKLGYKNPKFSNAFYSVPEEVDKIERELSERENNFRVASDTVHEMEEELKKLRDHEPDLESQISKAEMEADSLASELTLAEQQVKEAEMAYVKAVSQLNVVMKNLERLRGEYNDLQSETKTKKEKIKGLQDEIMKKLQMQNSKVESVCQKLDILVAKLKKVKSASKKSGGDVVKFQKLLQNSERDVELSSDELKVIEEQLKHTKLALAENDTNMNETLNLKVELKEQSEQLKEQMEDMEESINEFKSIEIEMKNKLEKLNSLLTYIKSEIELIESKINELSYYVEET | |||||||||||||
4 | 1hciA | 0.11 | 0.08 | 0.79 | 1.28 | CNFpred | ----------------------------------------SAVNQENERLMEEYERLASELLEWIRRTIPWLENR-QAMQKKLEDFRDYRRKKPPKVQEKCQLEINFNTLQTKLRISNRPAFMPSE-------GKMVSDIAGAWQRLEQAEKGYEEWLLN---EIRRLERLEHLAEKFRQKASTHETWAYGKEQILLQKESASLTEVRALLRKHEAFESDLAAHQDRVEQIAAIAQELNELYHDAVNVNDRCQKICDQWDRLGTLTQK-----------------------------------RREALERMEKLLETIDQLHLEFAKRAAPFNNWMEGAMEDLQDMFIV--HSIEEIQSLITAHEQFKATLPEADGERQSIMAIQNEVEKVIQSYN-TMDELRTKWDKVKQLVPIRDQSLQEELARQHANERLRRQFAAQANAIGPWIQNKMEEIARSSIQITGA----------------------------LEDQMNQLKQYEHNIINYKNNIDKLEGDHQLIQEA-KHTNYTMEHIRVGWELLLTTIARTINEVETQILTRD-- | |||||||||||||
5 | 1sjjA | 0.12 | 0.12 | 0.98 | 1.24 | MUSTER | EDIVGTARP-KAIMTYVSSFYHAFSGAQKAETAANRICKVLAVNQENEQLMEDYEKLASDLLEWIRRTIPWLENRAPTMQAMQQKLEDFRDYRRLHKPPKVQEKCQLEINFNTLQTK-LRLSNRPAFMPSEGKM--VSDINNAWGGLEQAEKGYEEWLLNEIR---RLERLDHLAEKFRQKASIHESWTDGKEAMLQQYETATLSEIKALLKKHEAFESDLAAHQDRVEQIAAIAQELNELYYDSPSVNARCQKICDQWDNLGALTQKRREALERTEKLLETIDQLYLEYAKRAAPFNNWMEGAMEDLQD--TFIVHTIEEIQGLTTAHEQFKATLPDADKERQAILGIHNEVSKIVQTYHVNMAYTTITPQEINGKWEHVRQLVPRRDQALMEEHARQQQNERLRKQFGAQANVIGPWIQTKMEEIGRIHGTLEDQLNHLRQYEKSIVNYKPKIDQLEGDHQQIQEALIFDNKHTNYT---MEHIRVGWEQLLTTIARTINEVENQILT-RDAKGISQEQMNEFRASFNKKTGMMDCEDFRACLISMGYNMGEAEFARIMSIVDPN | |||||||||||||
6 | 6z9lA4 | 0.14 | 0.05 | 0.34 | 1.12 | EigenThreader | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AEAEKVKAEKEQAAKEAELANKQKEEAKAKDQKTKDDQAVADQQTVVTTSQEKVTDAKADTAAKQADLTAKENALKDKQAATKQAQNTLDNSKEELKKSKEELQQEIASNQEKLATAQQAESDAQQARSASQQALNTAKTTQATAEKELSVHKATLANLQAVATKSTTNYEEKVRQTATAEKSLQQTKDQLATI | |||||||||||||
7 | 6yvuB | 0.10 | 0.10 | 0.98 | 2.57 | FFAS-3D | QGEVEQMKPKAELEDII----GTANYKPLIEERMGQIENLNEVCLEKENEKNSLESGKETALEFLEKEKQKLLQSNSKLASTLEKISSSNKDLEDEKMKFQESLKKVDEIKAQRKEDRISSCSSKEKTLVLERRELEGTRVSLEERTKNLVSKMEKAEKTLKSTKHSISEAENMLEELRGQQTEHETEIKDLTQLLEKERSILKNISAEIIRHEKELQEKESQIQLAESELSLLEETQAKLKKNVETLEEKILAKKTHKQELQDLILDLKKKLNSLKDERSQGEKNFTSAHLKLKEMQKVLNAHRQRAMEARSSLSKAQEEVDKIERELSERENNFRVASDTVHEMEEELKKLRDHEPDLESQISKAEMEADSLASELTLAEQQVKEAEMAYVKAVAQLNVVMKNLERLRGEYNDLQSETKTKKEKIKGLQDELQMQNSKVESVCQKLDILVAKLKKVKSASKKSGGDVV----KFQKLLQNSERDVELSSDELKVIEEQLKHTKLALAENDTNMNETLNLKVELKEQSEQLKEQMEDMEESINEFKSIEIEMKNKLEKLNSLLTY- | |||||||||||||
8 | 6yvuA | 0.08 | 0.08 | 1.00 | 1.78 | SPARKS-K | AAGTKMFEDRREKAERTMSKKETKLQENRTLLTEEIEPKLEKLRNEKRMFLEFQSTQTDLEKTERIVVSYEYYNIKHKHTSIRETLENGETRMKMLNEFVKKTSEEIDSLNEDVEEIKLQKEKEKLENKENGLLNEISRLKTSLSIKVENLNDTTEKSKALESEIASSSAKLIEKKSAYANTEKDYKMVQEQLSKQRDLYKRKEELVSTYNAQLAKAKTELNEVSLAIKKSSMKMELLKKELLTIEPKLKEATKDNELNVKHVKQCQETCDKLRARLVEYGFDPSRIKDLKQREDKLKSHYYQTCKNSEYLKRRLFSITKAMEFIPETAKKITQKYNQIQKQIETIQADLNHVTEELQTQYATSQKTKTIQSDLNLSLHKLDLAKRNLDARNEEILRDIGECENEIKTKQMSLKKCQEEVSTIEKDMKEYNELKKELKLLAKELEEQESESERKYDLFQNLELETEQLSSSNKTLLHNHLKSIESLKLENSDLEGKIRGVEDDLVTVQTELNEEKKRLMDIDDELNELETLIKKKQDEKKSSELELQKLVHDLNKYKSNTNNMEKII | |||||||||||||
9 | 5j1iA | 0.12 | 0.07 | 0.60 | 1.15 | CNFpred | --------------------------------------------------------------SRCQRCISELKDIRLQLEACETRTVHRL------------------------RLPLDKEPARECAQRIAEQQKAQAEVEGLGKGVARLSAEAEKVLAL-------------------PAAPTLRSELELTL--------------------------------GKLEQVRSLSAIYLEKLKTISLVIRGTQGAEEVLRAHEEQLKEAQAVPA-----------------------------TLPELEATKASLKKLRAQAEAQQPTFDALRDELR---------------------GAQEVGERLQQRHGERDVEVERWRERVAQLLERWQAVLAQTDVRQRELEQLGRQLRYYRESADPLGAWLQDARRRQEQIQAM-------------------------------DSQAVREQLRQEQALLEEIERH----GEKVEECQRFAKQYINAIKDYELQLVTYKAQLE--QSGSESVIQEYVDLRTHYSELTTLTSQYIKFISET | |||||||||||||
10 | 5lj3T | 0.09 | 0.09 | 0.99 | 1.09 | MUSTER | EYWKDKQI-RWLYERFCSQFVTDTSIWEDYIRWESETSRIFWLFQRCLKSCDCDRICLSYLELAIEMIRHALASSLMKMEHRKVWDPVIKFVEEKVESTDEAELINVLLVKGFTIWSSHILERYQQKRNESLATLALTRNITIKSVYEKYLLNFNYLASLEKLGDNQYEEFMRQMNGPDKWLFLILSLAKYYIGRLDSCGDLLKKSLQQFDRIYNFYLLFEQECSQFILGKLKENDDWTEKLQAHMATFESLINLYDIYLNDVALRQDSLVETWMKRVSLQKAAEKCNVYSEAILKIDPRKVGTPGSFGRLWCSYGDLYWRSNAISTARKLWTQSLKPYIEDLEEIYLNWADRELDVPTNPEILLSLRIWSKYIDYLEAYIFNKTKMAYNTVIDLRPAMAENFALFLQNYE-VMESFQVYEKTIPLFP-PEIQYELWIEYLEVATSHPEHIRFLFEKALKNLCSNGIDCKTIFIAY-SVFEERSKSIEILRRGAVILESRLQLWRMCISKAESVTRELYQECIQILEFVIKFSDFESRAREILAYGAKLNTELWDSFEIFELK---- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |