>PF05684 (363 residues) TALFATGAFGIWSEKTKIGSALSGALVSTLVGLAGSNLGIISCESPAYAVVLEFLLPLAV PLLLFRADLRRVIRSTGTLLLAFLLGSVATTVGTVVAYWIVPMRSLGQDSWKIAAALMGR HIGGAVNYVAIADALGVSSSVLASGLAADNVICAVYFTTLFALASKIPAETSTSSNEDGM ESGSVSGEKLPVLQLATSLAVSLAICKAGSYVTKLFGIQGGILPAVTAIVVILATAFPTQ FNGLAPSGEAMALILMQVFFTVVGASGNIWNVVKTAPSIFMFALVQIAVHLVIILGLGKL FRFDQKLLLLASNANVGGPTTACGMATAKGWSSLVVPGILAGIFGIAIATFLGIGFGVTV LKF |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | TALFATGAFGIWSEKTKIGSALSGALVSTLVGLAGSNLGIISCESPAYAVVLEFLLPLAVPLLLFRADLRRVIRSTGTLLLAFLLGSVATTVGTVVAYWIVPMRSLGQDSWKIAAALMGRHIGGAVNYVAIADALGVSSSVLASGLAADNVICAVYFTTLFALASKIPAETSTSSNEDGMESGSVSGEKLPVLQLATSLAVSLAICKAGSYVTKLFGIQGGILPAVTAIVVILATAFPTQFNGLAPSGEAMALILMQVFFTVVGASGNIWNVVKTAPSIFMFALVQIAVHLVIILGLGKLFRFDQKLLLLASNANVGGPTTACGMATAKGWSSLVVPGILAGIFGIAIATFLGIGFGVTVLKF | |||||||||||||||||||
1 | 5a1sA | 0.13 | 0.13 | 0.97 | 1.17 | DEthreader | GLMFVMGAIFGEIGKRLPFNKGGAPVMIFLVAAYFVYAGFTQEIDAISNVMDKNFLNLFIAVLITGIVNRKLLLKSLGYIPTILAGIVGASLFGIVIGLCFGIPVDR-IMMLYVLPIMGG---GNGAGAVPLSEIHREYSTAIAILTIANIFAIIFAALLDMVGKKYTWLSGERKASFKTEDDEKAGQ-ITHRETAVGMVLSTTCFLLAYVVAKKILPSIHYFAWMVLIVAALNASLCSEIKAGAKRLSDFFSQLLWVLMVGVGVCTDLQEIIDALTANVVIAAIIVVGAVVGAAIGGWLIGFYPIESSITGLCMANGDLEVLSACNR------MN-LISYAQISSRLGGGIVLVIASIVFSM | |||||||||||||
2 | 5a1sA | 0.13 | 0.12 | 0.96 | 1.17 | DEthreader | GLMFVMGAIFGEIGKRLPFNKGGAPVMIFLVAAYFVYAGIFTQKIDAISNVMDNFLNLFIAVLITGILSVNRKLLLKSLLGYIPTILAGIVGASLFGIVIGLGIPVDRIMMLYVLPIMGG---GNGAGAVPLSEIHREYSTAIAILTIANIFAIIFAALLDMVGKKYTWLSGRKASFKTEDDEKAGQI-TH-RETAVGMVLSTTCFLLAYVVAKKI-PS-VSIHYFAWMVLIVALSLCSIKAGAKRLSDFFSKQLLWVLMVGVGVYTDLQEIIDALTANVVIAAIIVVGAVVGAAIGGWLIGFYPIESSITGLCMANGDLEVLSAC-NR--M--N--LISYAQISSRLGGGIVLVIASIVFSM | |||||||||||||
3 | 5a1sA | 0.14 | 0.14 | 0.98 | 3.76 | HHpred | ALMFVMGAIFGEIGRLPIFNKYGAPVMIFLVAAYFVYAGIFTQKSNVMDNFLNLFIAVLITGAILSVNRKLLLKSLLGYIPTILAGIVGASLFGIVIGLCFGIP-VDRIMMLYVLPIMGGGNGAGVPLSEIHSVTGRSRETAIAILTIANIFAIIFAALLDMVGKK---YTWLSGEGELRSEDDEKAGQITHRETAVGMVLSTTCFLLAYVVAKKILIHYFAWMVLIVAALNASGLCSPEIKAGAKRSDFFSKQLLWVLMVGVGVYTDLQEIIDLTFANVVIAAIIVVGAVVGAAIGGWLIGFYPIESSITCMANRGGSGDLEVLSACNR-MNLISYAQISSRLGGGIVLVIASIVFSMMVL- | |||||||||||||
4 | 5a1sA | 0.12 | 0.12 | 0.97 | 1.38 | DisCoVER | GLMFVMGAIFGEIGKIFNKYIGGAPVMIFLVAAYFVYAGIFTEIDAISNVMLNLFIAVLITGAILSVNRKLLLKSLLGYIPTILAGIVGASLFGIVIGLC-----FGIPVDRIMMLYVLPIMGGGAGAVPLSEIYRSREEYYSTAIAILTIANIFAIIFAALLDMVGKLSGEGELVRSFKTEDEKAGQITHR-ETAVGMVLSTTCFLLAYVVAKKSGVSIHYFAWMVLIVAALNA--SGLCPEIKAGAKRLSDFFSWVLMVGVGVCTDLQEIIDATFANVVIAAIIVVGAVVGAAIGGWLIGFYIESSITAGLCMANRGSGDLEVLSACNRMNLISYAQISSRLGGGIVLVIASIVFSMMV-- | |||||||||||||
5 | 5a1sA | 0.14 | 0.13 | 0.97 | 0.52 | MRFsearch | --MFVMGAIFGEIGKLPIFNKGGAPVMIFLVAAYFVYAGIFTQKEAISNVMLNLFIAVLITGAILSVNRKLLLKSLLGYIPTILAGIVGASLFGIVIGLCFG-----IPVDRIMMLYVLPIMGGGNGAGAYHSVTGRSRETAIAILTIANIFAIIFAALLDMVGKKYTW---LSGEGELVRKDDEKAGQITHRETAVGMVLSTTCFLLAYVVAKKILIHYFAWMVLIVAALNASGLCSPEIKAGAKRSDFFSKQLLWVLMVGVGVCTDLQEIIDATFANVVIAAIIVVGAVVGAAIGGWLIGFYPIESSITAGANRGGSGDLEVLSACNR-MNLISYAQISSRLGGGIVLVIASIVFSMMVL- | |||||||||||||
6 | 5a1sA | 0.14 | 0.13 | 0.99 | 2.72 | SPARKS-K | LMFVMGAIFGEIGKRLPIFNKYGAPVMIFLVAAYFVYAGIFTQKIDAISNVMNLFIAVLITGAILSVNRKLLLKSLLGYIPTILAGIVGASLFGIVIGLCFGI-PVDRIMMLYVLPIMGGGAGAVPLSEIYHSVTGRSYSTAIAILTIANIFAIIFAALLDMVGKKYTWLSGEGELVRKKTEDDEKAGQITHRETAVGMVLSTTCFLLAYVVAKKILPSIHYFAWMVLIVAALNASSPEIKAGAKRLSDFFSKQLLWVLMVGVGVCTDLQEIIDLTFANVVIAAIIVVGAVVGAAIGGWLIGFYPIESSITCMANRGGSGDLEVLSAC-NRMNLISYAQISSRLGGGIVLVIASIVFSMMVLE | |||||||||||||
7 | 5a1sA | 0.14 | 0.13 | 0.97 | 1.55 | MAPalign | -LMFVMGAIFGEIGRLPIFNKYGAPVMIFLVAAYFVYAGIFQKEIDAISNVMNLFIAVLITGAILSVNRKLLLKSLLGYIPTILAGIVGASLFGIVIGLCF-----GIPVDRIMMLYVLPIMGGGAGAVPLSEIVTY-YSTAIAILTIANIFAIIFAALLDMVGKWLSGEGELVRKASFKTEDDEKAGQITHRETAVGMVLSTTCFLLAYVVAKKGGVSIHYFAWMVLIVAALNAS--GLCPEIKAGAKRLSDFFSWVLMVGVGVCTDLQEIIDALFANVVIAAIIVVGAVVGAAIGGWLIGFYPIESSIAGLCMANGGSGDLEVLSACNRMNLISYAQISSRLGGGIVLVIASIVFSMMVL- | |||||||||||||
8 | 5a1sA | 0.13 | 0.13 | 1.00 | 1.13 | CEthreader | ALMFVMGAIFGEIGKRLPIFNKGAPVMIFLVAAYFVYAGIFTQKEMDKSNFLNLFIAVLITGAILSVNRKLLLKSLLGYIPTILAGIVGASLFGIVIGLCFGIPVDRIMMLYVLPIMGGGNGAGAVPLSEIYHSVTEYYSTAIAILTIANIFAIIFAALLDMVGKKYTGEGELVRKASFKTEDDEKAGQITHRETAVGMVLSTTCFLLAYVVAKKILPSIHYFAWMVLIVAALNASCSPEIKAGAKRSDFFSKQLLWVLMVGVGVCTDLQEIIDALFANVVIAAIIVVGAVVGAAIGGWLIGFYIESSITAGLCMANGGSGDLEVLSACNRMNLISYAQISSRLGGGIVLVIASIVFSMMVLE | |||||||||||||
9 | 5a1sA | 0.12 | 0.12 | 0.99 | 1.40 | MUSTER | ALMFVMGAIFGEIGKLPIFNKYIAPVMIFLVAAYFVYAGIFTQKSNVMDNFLNLFIAVLITGAILSVNRKLLLKSLLGYIPTILAGIVGASLFGIVIGLCFGIP-VDRIMMLYVLPIMGGGNGAVPLSEIYHSVTGRSYSTAIAILTIANIFAIIFAALLDMVGKKYTWLGELVRKASFKTEDDEKAGQITHRETAVGMVLSTTCFLLAYVVAKKILPSYFAWMVLIVAALNASGLCSPEIKAGKRLSDFFSKQLLWVLMVGVGVYTDLQEIIDALFANVVIAAIIVVGAVVGAAIGGWLIGFYIESSITAGLCMRGGSGDLEVLSACNRM-NLISYAQISSRLGGGIVLVIASIVFSMMVLE | |||||||||||||
10 | 5a1sA | 0.15 | 0.14 | 0.97 | 6.97 | HHsearch | ALMFVMGAIFGEIGRLPIFNKYGAPVMIFLVAAYFVYAGIFTQKEAISNVMLNLFIAVLITGAILSVNRKLLLKSLLGYIPTILAGIVGASLFGIVIGLCFGIP-VDRIMMLYVLPIM----GGGNGAGAVHSVTGRSRSTAIAILTIANIFAIIFAALLDMVGKKY---TWLSGEGEVRSEDDEKAGQITHRETAVGMVLSTTCFLLAYVVAKKILIHYFAWMVLIVAALNASGLCSPEI--KAGA-KRLSDFLLWVLMVGVGVYTDLQEIIDATFANVVIAAIIVVGAVVGAAIGGWLIGFYIESSITACMANRGGSGDLEVLSACNR-MNLISYAQISSRLGGGIVLVIASIVFSMMVLE | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |