Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200 220 240
| | | | | | | | | | | | |
| Seq | ASIAFRWRKRGAQGYLQPVTHVHRIALKDLQGVDRQKALVEQNTRQFVNGVPANNVLLTGARGTGKSSLVKAVLNKYAPKGLRVIEVEKQDLLDLPEIVDLVSARPERFILFCDDLSFEAEEAGYKALKAVLDGSVAAPSENVLVYATSNRRHLMPEFMQENLEARRVGDEIHPGETVEEKVSLSERFGLWVSFYPFSQDEYLSIVFHWLEYFQAPIPNRETVRQEALQWALQRGSRSGRVAWQFARDWAGR |
1 | 5mpbM | 0.17 | 0.14 | 0.82 | 1.17 | DEthreader | | ---------FD-SRVKAEVDEKPTETYSDVGGLDKQIEELVEAIVLPMKAFAPKGALMYGPPGTGKTLLARACAAQT---NATFLKLAAQLVGLVRDAFALAKEKA-PTIIFIDELDAIGVQRTMLELLNQLD--GFSSDDRVKVLAATNRVDVLD-P---------------------ALLR-SGRLDRKIEFPLPSEDSRAQILQIHSRKM-TTDDDIN--WQELARSTD--EF-NGAQLKAVTVEAGMA |
2 | 6matA | 0.18 | 0.15 | 0.83 | 3.51 | HHpred | | ------------ASKREGFSTIPDTTWSHVGALEDVRKKLEMSIIGPIKIKPAAGILLWGPPGCGKTLVAKAVANES---KANFISIKGPELLNVRQLFSRAKS-SAPCILFFDQMDALVPARVVNTLLTELDGVG--DRSGIYVIGATNRPDMIDEAIR------------RPG-----------RLGTSIYVGLPSAEDRVKILKTLYRNTVQGTT-DADLEK--VALDLRCTGFSGADLGNLMQAAAQA |
3 | 3h4mA | 0.17 | 0.14 | 0.80 | 0.57 | DisCoVER | | -------------AMEVDE--RPNVRYEDIGGLEKQMQEIREVVELPLKHPPPKGILLYGPPGTGKTLLAKAVATETN---ATFIRVVGSELVGASLVKDIFKLAKAPSIIFIDEIDAIAAKEVQRTLMQLLAEMDFDARGDVKIIGATNRPDILDPAI------------------------LPGRFDRIIEVPAPDEKGRLEILKIHTRMN-LADV---NLEEIAK-MTE---GCVGAELKAICDYVTM- |
4 | 5z6qA | 0.22 | 0.17 | 0.81 | 0.28 | MRFsearch | | ---------------NEIVDNGTAVKFDDIAGQDLAKQALQEIVILPSLRAPARGLLLFGPPGNGKTMLAKAVAAES---NATFFNISAASLKLVRALFAVAREL-QPSIIFIDEVDSLLCRRLKTEFLIEFDGVQSAGDDRVLVMGATNRPQELDEAV-------------------------LRRFIKRVYVSLPNEETRLLLLKNLLCKQGSPL-----TQKELAQLARMTDGYSGSDLTALAKDAALG |
5 | 6nyyA | 0.21 | 0.18 | 0.85 | 1.36 | SPARKS-K | | --------FSVGETTAKVLKDEIDVKFKDVAGCEEAKLEIMEFVNFLKGAKIPKGAILTGPPGTGKTLLAKATAGEAN---VPFITVSGSEFLEVRDLFALARKNA-PCILFIDQIDAVGRENTLNQLLVEMDGF--NTTTNVVILAGTNRPDILDPALL------------RPG-----------RFDRQIFIGPPDIKGRASIFKVHLRPLKLDSTLEK--DKLARKLASLTPGFSGADVANVCALIAAR |
6 | 1r6bX | 0.15 | 0.13 | 0.90 | 0.55 | MAPalign | | NFTTNLNIVPEVMACTIYSLDNLGDRLKLVFGQDKAIEALTEAIKMAREHKPVGSFLFAGPTGVGKTEVTVQLSKAL---GIELLRFDMSEYVDQGLLTDAVIKH-PHAVLLLDEIE-KAHPDVFNILLQVMDNLRKADFRNVVLVMTTNAG-VRAMEEIKKI----------------FTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELSLEVS--QEARNWLAEKGY-DRAMGARPMARVIQDNLKK |
7 | 1j7kA | 0.15 | 0.12 | 0.78 | 0.38 | CEthreader | | ---------------------LRPKSLDEFIGQENVKKKLSLALEAAKMGEVLDHVLLAGPPGLGKTTLAHIIASEL---QTNIHVTSGPVLVKQGDMAAILTSLERGDVLFIDEIHRLN-KAVEELLYSAIEDFQIIDIQPFTLVGATTRSGLLSSPLRS-------------------------RFGIILELDFYTVKELKEIIKRAASLMDVE------IEDAAAEMIAKRSRGTGRIAIRLTKRVRDM |
8 | 5z6qA | 0.21 | 0.17 | 0.83 | 0.87 | MUSTER | | --------NLANLIMNEIVDNGTAVKFDDIAGQDLAKQALQEIVILPSLRAPARGLLLFGPPGNGKTMLAKAVAAES---NATFFNISAASLTSVRALFAVAREL-QPSIIFIDEVDSLLCRRLKTEFLIEFDGVQSAGDDRVLVMGATNRPQELDE-------------------------AVLRRFIKRVYVSLPNEETRLLLLKNLLCKQGSPLT-QKELAQLARM-----DGYSGSDLTALAKDAALG |
9 | 6az0A | 0.20 | 0.15 | 0.76 | 0.99 | HHsearch | | -------------------------KFDDVCGCDEARAELEEIVDFLKDGKLPKGVLLTGPPGTGKTLLARATAGEA---GVDFFFMSGSEFDEIRDLFAQARS-RAPAIIFIDQLDAIGGKQTLNQLLVELDGFS--QTSGIIIIGATNFPEALDKALT------------RPG-----------RFDKVVNVDLPDVRGRADILKHHMKKITLADNDP-------TIIARGTPGLSGAELANLVNQAAVY |
10 | 2qz4A | 0.22 | 0.17 | 0.76 | 1.52 | FFAS-3D | | -----------------------GVSFKDVAGMHEAKLEVREFVDYLKEAKVPKGALLLGPPGCGKTLLAKAVATELAMAGAEFVEVIGGGAARVRSLFKEARA-RAPCIVYID-----EIEQTLNQLLVEMDGM--GTTDHVIVLASTNRADLDGALMRPG------------------------RLDRHVFIDLPTLQERREIFEQHLKSLKLTQS----STFYSQRLAELTPGFSGADIANICNEAA-- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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