Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | MLQANLTFLGKTSVGPIMPRSYFGNAGAIQAPRIQKTATGEYTITFLTSRDIKETQPPAVHINFQDEVNGAFCSRLVKPVQFTYHPENSQFPWKILFQIAVQKGDGSYTDSNIVMITFAMANCNNQAVFNSCKNRVNAELNS |
1 | 3a23A2 | 0.06 | 0.04 | 0.56 | 0.58 | DisCoVER | | -GAYAATGRYTGVT--------A-------------ASTG----------------LNVVDVAYTNRTATLQVNSFPPSAGTVSVEVS----L-------SKGSANTLALSGGPATEG---------IT--VR-PLPGTN-- |
2 | 3i6sA | 0.06 | 0.05 | 0.88 | 0.67 | DEthreader | | -VAVLDS-IWPESASFKLIGA-----GCATAGNFAKGPGTARGVASSSAGNLNNGSILCVASGTDTFRSATF--QTYLTAPVVSG---GISKPDLAGVLILASTDYILE--SGTSMAPH--GIAAMKA-PAIRAMMTTAAGR |
3 | 5js4A5 | 0.13 | 0.10 | 0.76 | 0.59 | CEthreader | | ---MMLTYDQS-----------FSTPQNNNGWKIVKESTGVYRVERVSGNTSVITNGHIVVGSPLMGSRLGTGTGATHGIQMIETGSWTSYTEAAGFKVFWRDSSNALVDPHRFTVAFTATS-------------------- |
4 | 3rvaA2 | 0.04 | 0.04 | 0.93 | 0.53 | EigenThreader | | AVAGHKAAEQAFREGKYAAASRQGDNDVPYTSIVLNEHASIFLIDAGANYHG----YAADITRTYAQEGVHITRTFFPHGIGHFLGLQVHDVGVFTIEPGLYFILRDLKATFGGIRIEDNIIRDKNENMTRDLDL------N |
5 | 4c90A2 | 0.14 | 0.11 | 0.73 | 0.25 | HHpred | | -----IPYMGRTLSGALMPYTQ-----PTDGASISLKGIDKVTVHVIVKLAFHDRKGHEYSIGFEGG----------KDQTINFNHNLVYSIYYKKAKLNVSDGMQTPLDPGIVLLVVDYGGYK------------------ |
6 | 5ixcA1 | 0.15 | 0.07 | 0.47 | 0.37 | MRFsearch | | ---------------------------------------WQLTVRVLEARNLRSEADPYVILQLSTA----------PGMKFKTKTLTDHPVWNEAFRFLIQSQ-----VKNVLELSIYDE--------------------- |
7 | 3jbwB1 | 0.17 | 0.13 | 0.77 | 0.40 | FFAS-3D | | LVQPGFSLLDLEG-----DVYLFGQKGWPKR----SCPTGIFGV------RIKKGELKLRAISFSNN--SSYLPPLRCPAIAHFEAQDGKPE---CYLIHGGRTPNNELSSSLYMLSVDSRGCNRKVTL------------- |
8 | 4lo4B2 | 0.13 | 0.11 | 0.87 | 0.51 | SPARKS-K | | -----GVIDPSENIQEI--NTAISDNYTYNIPG--IVNNNPFYILFTVNTTGQNNLPSLKIYEAIGSGNGNLCDDDIKAINYITGFDSPNAKSYLVVLLN---------KDKNYYIRVPQTSSNNQIQFKREEGDLRNLMNS |
9 | 2uzpA | 0.12 | 0.09 | 0.74 | 0.68 | CNFpred | | --------------------------GRLQL-EIRAPTADEIHVTVGEARNLIPMSDPYVKLKLIPDP------RNLTKQKTRTVKATLNPVWNETFVFNLKP----GDVERRLSVEVWDWDDFMGAMSFGVSELLKAPVDG |
10 | 2x12A | 0.07 | 0.06 | 0.87 | 1.00 | DEthreader | | --------FTISDFS-GTQYYWAGGNLKNPISSISAVYDISWTVEYDPTIKSPALKLTYTGIYIDTSSDS--KLS-TPTVLISGTT-K--GVTKHTITFDTAF-SGRANDLLEIK-LAATTLSDPHFYEDGSGGYQV-SGVN |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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