Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | YARFDGRATRSEYWLFVLVQWVLLVGVIAGLAAALPREAASAPFMVMGVATVLITLLLPNLAVTSRRLHDSGLSFAWWLISFIPLIGGFVNLVLMCLGGTRGGNQYGPDP |
1 | 6ob6A | 0.08 | 0.07 | 0.95 | 1.17 | DEthreader | | FTYSFLHQR-IPQSVRILGSLVAILLVFLITAILVKVQLDALFVITMIKIVLINSFGAILQGSLFGLAGLFPASTAAIMSGQLAVILTIICYLGLPYRYYQQ-KPAE--- |
2 | 5ezmA3 | 0.12 | 0.10 | 0.85 | 1.05 | SPARKS-K | | ---------SPRSWGKQLIGMAIVAACGLLASPVVATLNANSFYRAYAVWVAVAFVVMLLGIAVARLLLRRGVLPSVAVYAMGMYLGFTVALLGHETVGRPAS------- |
3 | 5uj9A3 | 0.04 | 0.04 | 0.95 | 1.00 | DEthreader | | EDTSEQVPLVKNWFVLYKTFGPYFL-MSFLFKAVHLMMACLQTLVLHQYFHICFVSGMRIKTAVIGAVYRKAVIVNLMSVDRSQAVSLKRLRVFL-SHED-REEQEI--- |
4 | 1z23A | 0.02 | 0.02 | 0.92 | 1.17 | DEthreader | | ----RPLVAVETLARLQQGVSTTVA-HLLDLVGSASGPGEPPVQDLKAAVAAVHGAVHELLEFARSAVSSATHLSRQLQKMEVAVEDAKQLASFLHGNAS--LL-F-RRT |
5 | 5nl2A3 | 0.12 | 0.10 | 0.81 | 1.05 | SPARKS-K | | ---------RFPAYFTNLVSIIFMIAVTFAIVLGVIIYRISTAATAVIINLVVIILLDEVYGCIARWLTKIEVPRLTFKAFLLKFVNSYTPIFYVAFF------------ |
6 | 1vdkA3 | 0.07 | 0.06 | 0.90 | 1.00 | DEthreader | | --THLMLQEIGSWAAQLKTTLAAVKEME-KGLYNLARALA-AHDELVNVMGAIRTLAGALMKIGNDVRWLASVNPTQVEALVLDAASFAHLAQG--IEPNLRI---YL-- |
7 | 1orqC | 0.08 | 0.05 | 0.65 | 0.68 | DisCoVER | | ----AVMLTVLYGAFAIYIVE---------------------------YPDPNSSIKSVFDALWWAVVTATTVGYGDV---VPATPIGKVIGIAVMLTGI---SALTLL- |
8 | 6r9tA | 0.10 | 0.09 | 0.93 | 1.17 | DEthreader | | -APIND-MSYFGCLDSVMENSKVLGEAMTGISQNAKNGNLPEFGDAISTASKALCGFTEAAAQAAYLVGVSDGRMEPIVISATSIKLITSMRDK--APGECA----NAAR |
9 | 4zowA2 | 0.08 | 0.08 | 0.99 | 0.49 | CEthreader | | NLLLARLTSRRTVRSLIIMGGWPIMIGLLVAAAATVISS-HAYLWMTAGLSIYAFGIGLANAGLVRLTLFASDMSKGTVSAAMGMLQMLIFTVGIEISKHAWLNGGNGLF |
10 | 3bbnB | 0.03 | 0.03 | 0.93 | 0.67 | EigenThreader | | KQFLTKNKAADSVARAAIRARETRLHKFRDLRMEQTAGRLARLPVKRQLSHLQGIKYMPDIVII-VDQ--QEEYTALRECIT-----LGIPTICLIDTNCANDDAIASIR |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|