Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | LLVYETSKQDPIVPFLLNLFLGFGIGSFAQGDILGGSLILGFDAVGIGLILAGAYLDIKALDGITKKAAFQWTWGKGVMLAGVVTMAVTRLTEIILPFTFANSYNRKLKNSLNVALGGFEPSFDVAMGQSSALGFELSFKKSY |
1 | 5kk2E | 0.03 | 0.02 | 0.73 | 0.65 | DisCoVER | | LTIA-----VGT-DY-WLYSEVMTHSGRTCCNFKGLCKQAVRASSIFPILSVILLFMGGLAASERHNIILSAGIFFVSAGLSNIIGIIVY--SY--GW-SFYFGALSFIIA---------------EGVVFI----------- |
2 | 6g3dA | 0.05 | 0.04 | 0.87 | 1.00 | DEthreader | | -------APEFQE--TIEAVIGYREAVVH-KAGHYLMAISENLAKNLDRYRELYARINLCPLSVSIEGVAG-WDHVAEHAFVNAVFLSGLSRLASIQSAELDASFA-GTSS-MQKKNPDLERKAAAALEPSIDAAAA------ |
3 | 3jacA | 0.15 | 0.13 | 0.86 | 0.66 | CEthreader | | --------------------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
4 | 6ukjA | 0.08 | 0.07 | 0.91 | 0.62 | EigenThreader | | VTSETHNFICMIMFFIVYSLFGHRSF-------------NLQFFAISMLDACSVILAFIGLTRTSIIFNLVLISSLIPVCFSNMTREIVFKKLNAMVSFFQLFTSCLTNIKNGFACLFLGRNTVVENCGLGMAKLCDDCDGAW |
5 | 5tcxA | 0.17 | 0.12 | 0.69 | 0.21 | HHpred | | ------TKSIKYLLFVFNFVFILGVALWLRHPNTFYVGIYILIAVGAVMMFVGFLG-YGAI-------QQ--L--LGTFFTCLVILFACEVAAGIWGFVNKDQIAKDVKQFYDQAL--------------------------- |
6 | 5tcxA | 0.16 | 0.11 | 0.68 | 0.53 | MRFsearch | | -------KSIKYLLFVFNFVFILGVALWLRHPNTFYVGIYILIAVGAVMMFVGFLGY------------GAIQQLLGTFFTCLVILFACEVAAGIWGFVNKDQIAKDVKQFYDQAL--------------------------- |
7 | 4rnbA3 | 0.11 | 0.07 | 0.66 | 0.49 | FFAS-3D | | -----------MAPLCLMVLAYLQIFRKLWCRKTARMLMVVLLVFAICYLPISILNVLKRVFGMFAHDR------ETVYAWFTFSHWLVYANSAANPIIYNGKFREEFKAAF------------------------------- |
8 | 5twvB | 0.11 | 0.10 | 0.96 | 0.96 | SPARKS-K | | LTTIRAFRYEARFQQKLLEYTDSNNIASLFLTAANRWLEVCMEYIGACVVLIAAATSISNSLHRELS---AGLVGLGLTYALMVSNYLNWMVRNLADMEIQLGAVKRIHALLGKI---QIQNLSVRYDSSLKVLKHVNTLISP |
9 | 5oqtA | 0.11 | 0.08 | 0.67 | 0.77 | CNFpred | | ------------TMLGIGAIIGTGIFVLTGVAAAGPALVLSFILSGLACVFAALCYAEFASTVP-------VSGSAYTYSYATFGELIAWILGWDLILEYGVASSAVAVGWSGYF---------------------------- |
10 | 5i6jA | 0.02 | 0.01 | 0.79 | 1.00 | DEthreader | | -------------------KEIRQLTQMKLKGQQLQDDLMKVLNELYSVMKTYHMYNADSISAQYTENKLKAIKARNEYLLALEATNASVFKYYHDLSDLIDQCCDLGYH-ASLNRALRFLELE--FDV-SDCFQY------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|