>PF05621 (190 residues) RIERIRAPRWIGYSRTQAILAKLEDLLVWPKSHRMPNMLLVGDTNNGKTMLVQRFRTRHP AHDNPQGQGVRVPVLMIQAPPVPDEGRFYNAILELLFAPYKPNDRVDKKQAQVIKLLRHV DLRMLVIDEIHHILAGNLNRQRSFLNVIKYLGNELQVPIVGIGTKDAFRAIQTDPQLANR FEPALLPRWT |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | RIERIRAPRWIGYSRTQAILAKLEDLLVWPKSHRMPNMLLVGDTNNGKTMLVQRFRTRHPAHDNPQGQGVRVPVLMIQAPPVPDEGRFYNAILELLFAPYKPNDRVDKKQAQVIKLLRHVDLRMLVIDEIHHILAGNLNRQRSFLNVIKYLGNELQVPIVGIGTKDAFRAIQTDPQLANRFEPALLPRWT | |||||||||||||||||||
1 | 2qbyB | 0.10 | 0.09 | 0.93 | 1.33 | DEthreader | ----VFPVFEIPF--REDILRDAAIAIRYFKNEVKFSNLFLGLTGTGKTFVSKYIFNEIEVKKEDE-EYKDVKQAYVNCRVGGTPQAVLSSLAGKLGFSVPHGINLGEYIDKIKNGTRNIRA-IIYLDEVDTLVKRR--GGDIVLYQLLRS--DANISVIMISDINVRDYM-EPRVLSSLGPSVIFKPYG | |||||||||||||
2 | 1fnnA1 | 0.21 | 0.17 | 0.84 | 1.63 | HHpred | -----------REQQLQQLDILLGNWLRNP-GHHYPRATLLGRPGTGKTVTLRKLWELYK-D------KTTARFVYINGFIYRNFTAIIGEIARSLNIPFPRRGSRDEFLALLVEHLRERDYMFLVLDDAFNL-------APDILSTFIRLGQEFRIALVIVGHNDAVL-NNLDPSTRGIMGKYVIR--- | |||||||||||||
3 | 2v1uA1 | 0.19 | 0.18 | 0.92 | 0.58 | DisCoVER | -PDYV----PDVLPHREAELRRLAEVLAPALREKPSNALLYGLTGTGKTAVARLVLRRLEAR-ASSL-GVLVKPIYVNARHRETPYRVASAIAEAVGVRVFTGLSVGEVYERLVKRLSRRGIYIIVLDEIDFLPKR---P--GGQDLLYRITRIELVSLVGITNSLFVENL--ERVKSSLGVELVFPPY- | |||||||||||||
4 | 1fnnA | 0.16 | 0.15 | 0.93 | 0.43 | MRFsearch | --SYVPKRLPHREQQLQQLDILLGNWLRNPGH-HYPRATLLGRPGTGKTVTLRKLWELYKDKT-------TARFVYINGFIYRNFTAIIGEIARSLNIPFPRGLSRDEFLALLVEHLRERLYMFLVLDDAFNLA---PDILSTFIRLGQEADKLGRIALVIVGHNDAVLNN-LDPSTRGIKYVIRFSPYT | |||||||||||||
5 | 2p65A | 0.20 | 0.17 | 0.89 | 1.23 | SPARKS-K | LARAGKLDPVIGRD---TEIRRAIQILS---RRTKNNPILLGDPGVGKTAIVEGLAIKIVQGDVPD-SLKGRKLVSLD--------------LSSLIAGAKYRGDFEERLKSILKEVQDAEGVVMFIDEIHTVVGAGAVAALDAGNILKPMLARGELRCIGATTSEYRQFIEKDKALERRFQQILVEQPS | |||||||||||||
6 | 1w5tB | 0.13 | 0.13 | 0.95 | 0.58 | MAPalign | ------PPELRVRGEAEALARIYLNRLL-SGAGLSDVNMIYGSGRIGKTTLAKFTVKRVSEAAA--KEGLTVKQAYVNAFNAPNLYTILSLIVRQTGYPIVRGAPALDILKALVDNLYVEHYLLVILDEFQSMLSSPRIAAEDLYTLLRVHEEISRIGFLLVASDRALSYMRKIPQVESQIFKLHLPAY- | |||||||||||||
7 | 2v1uA1 | 0.22 | 0.21 | 0.97 | 0.41 | CEthreader | KRWVLLPDYVPDLPHREAELRRLAEVLAPLRGEKPSNALLYGLTGTGKTAVARLVLRRLEARASS--LGVLVKPIYVNARHRETPYRVASAIAEAVVRVPFTGLSVGEVYERLVKRLSRLGIYIIVLDEIDFLPKRPG--GQDLLYRITRINQE-LVSLVGITNSLGFVENLEPRVKSSLGEVLVFPPYT | |||||||||||||
8 | 1jbkA | 0.23 | 0.19 | 0.86 | 0.99 | MUSTER | RAEQGKLDPVIGR------DEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEG-LKGRRVLALD--------------MGALVAGAKYRGEFEERLKGVLNDLAKQGNVILFIDELHTMVGAM-----DAGNMLKPALARGELHCVGATTLDEYRQYIEDAALERRFQKVFVAEPS | |||||||||||||
9 | 4xgcD | 0.13 | 0.13 | 0.94 | 0.74 | HHsearch | RLQRDYTTLRGYAKERSNVRLLLQRTAE---MGESNSLLLLGPRGSGKTTLINSVLADLLPNKS---FGENTLIVHLDGNLHTDDRVALKSITVQMQLENAVFGSFAENLAFLLQCLK-SKSVIFILEEFDLFCAHHQTLLYNLFDVSQS--AQAPICVLGVTCLDVIELL--EKRVKSRFSQVFLPSLR | |||||||||||||
10 | 2p65A | 0.20 | 0.16 | 0.82 | 2.04 | FFAS-3D | --------------------TEIRRAIQILSRRTKNNPILLGDPGVGKTAIVEGLAIKIVQGD---------------VPDSLKGRKLVSLDLSSLIAGAKYRGDFEERLKSILKEVQDAEGVVMFIDEIHTVVGAGAEGALDAGNILKPMLARGELRCIGATTVSEYRQIEKDKALERRFQQILVEQPS | |||||||||||||
|
|
References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |