Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | QATKGQKQILEENNKTLDFYAKVMISIEVTYIIFRFTFFNFNSSWFSWVLLLIVTALYSGLYKFMESMAKPTYSESGALIDGGMDLNSESGTAEHVKDLIILTVITQGLAIFTDWMWLLMFLAPCRAIYLLWVYILAPWIFAQPDETEVDPKKQKKMERKMK |
1 | 5cwpA | 0.08 | 0.06 | 0.67 | 0.59 | DisCoVER | | VQRNPSSSDVNEALKLIVEAIEAAVRALEAAERT-----------GDPEVRELARELVRLAVEAAEEVQNP----------SSEVNE-------ALKKIVKAIQEAVESLRKREKARERVREAVERAEEVQRDPSG-------------------------- |
2 | 2j69A | 0.08 | 0.07 | 0.84 | 1.00 | DEthreader | | QVADRFIQDLERVAQVRSEMSVCLNKLAETINKAELAGDSGKLS--LERDIEDITIASKNLQQG--VFRRYG---PLTLLGINFLTRE--R-AIAELRQVRTLARLACNHTREAT-NSPGWAKWAGLSAGFDWKNILLNYFTVIGGI--------------- |
3 | 3j9tY | 0.08 | 0.07 | 0.88 | 0.62 | CEthreader | | ---FFGAIGCASAIIFTSLGAAYGTAKSGVGICATCVLRPDL-----LFKNIVPVIMAGIIAIYGLVVSGQKQALYTGFIQLGAGLSVGLSGLAAGFAIGIVGDAGVRGSSQQPRLFVGMILILIFAEVLGLYGLIVALLLNSRATQDVVC----------- |
4 | 2uxwA | 0.10 | 0.10 | 0.96 | 0.80 | EigenThreader | | VGSGFKVAMHILNNGRFGMAAALAGTMRGIIAKAVDHATNRHNFGLIQEKLARMVMLQYVTESMAYMVSANM-------DQGATDFQIEAAISKIFGSEAAWKVTDECIQIMGGMGFMVLRDLRIFRIRLFVALQGCMDKGGLSLSGLVHPELSRSGELAVR |
5 | 5v7pA2 | 0.09 | 0.07 | 0.78 | 0.21 | HHpred | | ----------------SPQYTIAAVSSWVEFFIETYFFPGKEIHWLSNIGLCVCILGEVLRKTAILTAGS-NFNHLVQEKSSDHVLVT-HGVYAWFRHPSYVGWFYWSIGQIILINPLCIPAYTLASWMFFKERI-Y-----------IEESMLLSF----- |
6 | 4aw6A | 0.12 | 0.10 | 0.86 | 0.27 | MRFsearch | | ---SETFEKSRLYQLDKSTFSFWSGLYSETEGTLILLFGGIEYEITQSLVFLLLATLFSALAGFMKDAIK-------------------KFVVTQCILLPVSSLLLYIIKIGGDYFFIYATLVVSLVLVTIYADYIAPLFDKTPLPEGKLKEEIEVMAKSID |
7 | 6e3yR2 | 0.10 | 0.10 | 0.96 | 0.79 | FFAS-3D | | --NTHEKVKTALNLFYLTIIGHGLSIASLLISLGIFFYFKSLSCQRITLHKNLFFSFVCNSVVTIIHLTAVANNQALVATNP-VSCKVSQFIHLYLMGCNYFWMLCEGIYLHNDNCWLYIIHGPICAALLVNLFFLLNIVRVLITKLKVTNLYMKAVRA--- |
8 | 5xtcr2 | 0.06 | 0.06 | 0.96 | 0.81 | SPARKS-K | | FLVLSLWGMIMTSSICLKSLIAYSSISHMALVVTAILIQTPWSFVILMIAHGLTSSLLFCLANSNYERTH------SRIMILSQGLQTLLPLMAFWWLLASLANLSVLVTTFSWSNITLLLTGLNMLVTALYSLYMFTTTQWGSLTHKPSFTRENTLMFMHL |
9 | 3rkoC | 0.09 | 0.07 | 0.72 | 0.94 | CNFpred | | ------PDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFA-------------------QTDIKRLIAYTSVSHMGFVLIAIYTGAYQGAVIQMIAHGLSAAGLFILCGQLYE-------------------- |
10 | 7anzC | 0.06 | 0.05 | 0.83 | 1.00 | DEthreader | | NLNQQLSYQYEIMFKLLINIK-FISKYNSSNWQEMYSIWTNKWILRCRVLHSRICSFIHELENYIVHDVIENFIKIHLFYSSLLNLLTREESLRQLRKMLDFIFHFNNYIVQVLTFLMQYEKFGENLVTFLATIKQ-------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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