Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | LIEKLKAKHGPLMFHQSGGCCDGSSPMCYPQGELIVGDSDVLLGEIGGCPFYISKAQYEYWKHTQLIIDVVPGRGGMFSLEGPEGVRFLTRSRV |
1 | 2d2aA | 0.17 | 0.14 | 0.83 | 1.00 | DEthreader | | HIRELVAKQPMVGVRLGVKQTFGYVLDSV---SEPDKD--DLLFEHDGAKLFVPLQAMPFID--GTEVDFVREG---------LNQIFKFHNPK |
2 | 2apnA | 0.17 | 0.14 | 0.81 | 1.35 | DisCoVER | | FTDAAANKVTDLKLRVYIGGCSGFQYGFTFDE-K-VNDGDLTIE-KSGVQLVIDPMSLQ-Y----LIGGT-------VDYT--ERFTVNNPNA- |
3 | 2apnA | 0.23 | 0.18 | 0.80 | 1.18 | MRFsearch | | --KSLISEEKLRVYITGGGCSGFQYGFTFDE---KVNDGDLTI-EKSGVQLVIDPMSLQYLI--GGTVDYTEG---------LEGSRFTVNN-- |
4 | 2qgoA | 0.15 | 0.14 | 0.94 | 1.17 | SPARKS-K | | AVDYLKRREILILITDDGGGYSIHFSIIWLDKV--DPDYPVKIANEQNVKIYTSDFDKTMLGP-NMVMDYNA---GSLSLSSDGSVDIGNGAAL |
5 | 1r95A | 0.15 | 0.13 | 0.86 | 1.06 | HHsearch | | RVNTFLANRGGLLGVRTSGCSGMAYVLEFVD---EPTPEDIVF-EDKGVKVVVDGKSLQFLDG--TQLDFVKEGNEGFKFTNPNVKD------- |
6 | 2d2aA | 0.16 | 0.13 | 0.82 | 1.00 | DEthreader | | HIRELVAKQPMVGVRLGVKQT-GYVLDSV----SEPDKDDLL-FEHDGAKLFVPLQAMPFID-G-TEVDFVREG--------L-NQIFKFHNPK |
7 | 1x0gC | 0.14 | 0.12 | 0.83 | 1.00 | DEthreader | | AIQELERQTQAAILRIQVQPSWRYDLALV---AE-PKPTDLL-TQSQGWTIAIAAEAAELLR--GLRVDYIEDLM---------GGAFRFHNPN |
8 | 1r95A | 0.13 | 0.10 | 0.74 | 1.17 | MRFsearch | | --NTFLANRGLRLGVRTSGCSGMAYVLEFVD---------DIVFEDKGVKVVVDGKSLQFLD--GTQLDFVKEG---------LNEGFKFTN-- |
9 | 2apnA | 0.19 | 0.18 | 0.94 | 1.12 | SPARKS-K | | KVKSLISEEENLKLRVGGGCSGFQYGFTFDEK---VNDGDL-TIEKSGVQLVIDPMSLQYLIGGT--VDYTEGEGSRFTVNNPNATSTCGCGSS |
10 | 1nwbA | 0.23 | 0.19 | 0.82 | 1.05 | HHsearch | | EIKKVAQENNIRIRVVPGGCSGFQYAMGFDDT---VEEGDHVF-EYDGVKVVIDPFSMPYVNG--AELDYVVDMGGGFTIRNP----------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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