Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | MHLNYDIYRMNSQMAGSALTQEEIKLWIYKNIFISTIGIIKSFDSETQEGVVLLSLYKNIEIKTRCISNMHFDLQENDEVILLQSSINLFDINDDNHFDKNYFYILRPINMQNATIKVDDFSIHTKNLMEIKNNN |
1 | 6lxhA2 | 0.07 | 0.05 | 0.73 | 0.55 | DisCoVER | | KKAQPLISSTNYIND-LSR-N--MT-AY--VNQKNTYTKQT-----------------FVTNLTGYKFNNFKIY------EVTQFQFDVIY-ATVDLMKGTSSNKQYII----QQVAYPKIDYTLDTYSWSNSY- |
2 | 6f91A | 0.05 | 0.04 | 0.76 | 0.67 | DEthreader | | TYPGAQQILSGRSG----M-FR--FT-----IMIDMNSNLRMIND-ST-ITGYKLVKG--RHVYFTAT-FSKKLT--GLRF-----VQDKKPVIYSEAWGKNLMACISFDTEEVTVKTAISA---------FQDS |
3 | 5o6fA | 0.15 | 0.09 | 0.59 | 0.56 | CEthreader | | ----------------------------------MAQGTVKWFNAEKGFGFIAPDDGSADVFVHYSQGNGFRTLEENQKVEFEIGEGA----------KGPQAQQVHALGGENLYFQGHHHHHH----------- |
4 | 4ru3A | 0.09 | 0.08 | 0.88 | 0.65 | EigenThreader | | ------------LIAALDARSRRDALDF----EVMIPAQVVQYDRAENIATIQPLIQRHQLVDIPVIAGISFPIQQGDIGWIYAATSQFLESLSMSKPNTFEHGLFIPDVFRRYTIQSTSGATITAPSNVTVDTP |
5 | 4ru3A | 0.06 | 0.05 | 0.88 | 0.39 | HHpred | | -------------LIA--ALDARSRRDA-LDFEVMIPAQVVQYDRAENIATIQITWDTEHNVQRHQLVHISFPIQQGDIGWIYAADRSMSKPNTGRIHKFEHGLFIPDVFRRYTSEDSAAMVIQSGDNIKITAPS |
6 | 4ru3A | 0.11 | 0.09 | 0.84 | 0.75 | MRFsearch | | ------------------AALDARSRRDALDFEVMIPAQVVQYDRAENIATIQPLQLVDIPVISMGAFHISFPIQQGDIGWIYAAIPDVFRRYTINSEDSAAMVIQSTSGATRISIRGDNIKITAPSNVTVD--- |
7 | 2k5nA | 0.12 | 0.05 | 0.44 | 0.37 | FFAS-3D | | -------------------------------------GTITTWFKDKGFGFIKDENGDNRYFHVIKVANPD-LIKKDAAVTFSAYAVKVVPLEHHHH-------------------------------------- |
8 | 5cywB | 0.18 | 0.15 | 0.83 | 0.63 | SPARKS-K | | IIINGDIALRNLQLHKGDN-------------YGCKLKIISN-DYKKLKFRFIIREVKGLTVFAYVIYEAVIHLYNKKTEILIYSD------DENELFKHYYPYISLNMISKKYKVKEEN---YSSPYIELIPYR |
9 | 1bheA | 0.15 | 0.11 | 0.72 | 0.81 | CNFpred | | -----------------------------KNITIAYSNIATG-----DDNVAIKAYKGRAETRNISILHNDFGT---GHGMSIGSETMGVY-VDDLKMTTNGLRIKSDKAGVVNGVRYSNVVMKNVKPIVIDTVY |
10 | 4k2bA | 0.09 | 0.07 | 0.81 | 0.83 | DEthreader | | ----------SGKSKNM-EDSIVNFVLSTKRYVITAIMI--MPANS---TEAVLA--SGGVFILPVHLYGKSMIRALKVIITTLSFNPYNFG------G-KAGAIA-TDNEELAKKCIQFSYKMDNLQAIGRKYL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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