>PF05602 (456 residues) QVIIRLMIIYYVVNFFKGSQNKQTPPPPKFESLKSNDSLHSQVTSNFTPSYLHPLWPVDS NMNLHIYVSEDENFTDFKNLDARIWYSPIHLGDWNDERDKSMDIQASVNVQNNGTLYAHI YLTLQEASPDPTDSAFQENDRVYQRKLLTRYYPKRKVIKTKNLISSSDDDQNEEVEDQET SGVTPIVSYWYKNLTLNIVSDNKIIPYGQLQPPVQSYIQLDKTTLDPSSKAGYYLPILFV NDFWLLREHLTPINETVKTLPLNIKYYPISLWKLQLYVQMGESFRTQAEMMGGDAHSEFD EIKRMLRETNPILLGVTFTVSILHSVFEFLAFKNDIAHWRNKEELTGVSVRSILLNIFFQ LVIFLYLMDNNEDTSWMILIGQGISLAIEVWKIKKAVDVEIKPSQRFFKYSISFVDKHKL SESETKTKEYDRLAFRYLSWIAFPLLFGYAIYSLIY |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 | | | | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | QVIIRLMIIYYVVNFFKGSQNKQTPPPPKFESLKSNDSLHSQVTSNFTPSYLHPLWPVDSNMNLHIYVSEDENFTDFKNLDARIWYSPIHLGDWNDERDKSMDIQASVNVQNNGTLYAHIYLTLQEASPDPTDSAFQENDRVYQRKLLTRYYPKRKVIKTKNLISSSDDDQNEEVEDQETSGVTPIVSYWYKNLTLNIVSDNKIIPYGQLQPPVQSYIQLDKTTLDPSSKAGYYLPILFVNDFWLLREHLTPINETVKTLPLNIKYYPISLWKLQLYVQMGESFRTQAEMMGGDAHSEFDEIKRMLRETNPILLGVTFTVSILHSVFEFLAFKNDIAHWRNKEELTGVSVRSILLNIFFQLVIFLYLMDNNEDTSWMILIGQGISLAIEVWKIKKAVDVEIKPSQRFFKYSISFVDKHKLSESETKTKEYDRLAFRYLSWIAFPLLFGYAIYSLIY | |||||||||||||||||||
1 | 5gkoA2 | 0.07 | 0.04 | 0.57 | 0.88 | DisCoVER | --TLGIIIGIASVV-TVVALG--------NGSQQQ---ILSNIS----------------------------------------------SLGTNTITVFQKTLVDADALVSAVSP---VSTSK-TRYQ-----QNEANATING---VSNDY---------------------------------FDVKG----LVFKDGQTFSQDVVIDTNTQKQNPIGQVVLLG--SVPARIIGIVEPQNVYPYTTVIVVRINDILRHQDIFTNSD--------SIRQTI---EKTTSTLVS-----AIA---V-------ISLVVGGI-GV---------NILVSVTERTQEIGVILQQFLIEA--ILVCLIGGVLGVLLSLIVAFVCSTLIG--VVFGFLPAK-N------------A-A--KLDPVAAL-SR----------------------------- | |||||||||||||
2 | 6vr4A | 0.03 | 0.02 | 0.64 | 0.67 | DEthreader | --------G--EG------------TIQNVIFSNGKAEGNDNGIDQLKSTVTPGPYKNVDFKR-------TNLRDHLFD--VAVLENIV----AYEDVNQTQAWTPISLDEKLAQPLKGVLVVGATTPLNPLTLSN-A--DWKLQQDLPVKTKPTLLGQIQKNIYSLFINTVSASNLSIG-LKTNGGSFIQLSN----------------------------------------------YRIPNQSNDPLIGILPEATIVAIPSDDNSLKFTYAGGKSGV-G----------------A-NLVDHNRS------T-TSSVAFLIRAGVHPDWIIS-----------FIG-QPVLRELADFTQRYE----------------------------IN-------------QESIEVGVH-G--IDLDVLKTFKGFQEQAKRLNESQKLNHFKKYNTS | |||||||||||||
3 | 4yeuA | 0.07 | 0.05 | 0.66 | 0.54 | CEthreader | ------------------------------------------------------------------------------------------------------------------PVDVSVSIFINKIYGVNTLEQTYKVDGYIVAQWTGKPRKTPGDKPLIVENTQIERWINNGL--------------WVPALEFINVVGSPDTGNKRLMLFPDGRVIYNARFLGSFSNDMDFQFVLELEPFSYNNQQLRFSDIQVYTENIDNEEIDEWWIRGKASTHISDIRYDHLSSVQPNQN------EFSRITVRIDAVRNYFSYIPNIILPMLFILFISWTAFWSTSYEA--NVTLVVSTLIAHIAFNILVETNLPKTPYYTGAIIFMIYLFYFVAVIEVTVQ----------------HYLKVESQPARAASITRASRIAFPVVFLLANIILAFLFF-- | |||||||||||||
4 | 3wiqA | 0.05 | 0.04 | 0.72 | 0.75 | EigenThreader | SGKFETCF-------------------ALTN---GYIGIRGINEEVFCEETPKSTAQVTLPNPIGLRIYINPLKCKQGVKGRFRFVS------MNNKNLIVQVVCENY------SALNVESFIDATTVNSKDVPNDRVKHYEIDKKKDF-----------------------------------------ADGIYLGITTDKK--------------------------------YKVGIASSTKN----QRCYFGYQGEEKLTVLVSSREVANVANKSVKFNIFHLISMALHGEGYKGHDTEIF----MLPFYIYTNAAKAMLMYRYNLLDAARENARKNGYKGAQFPWIESADIAYAVMNYVRATD------DIDFLLNYSEIIIETARFWASICKYNK---EKG----RYEINDVIGPDEFNYLAKWNLLKASELCNLLLEKYPKYFEKLSKK | |||||||||||||
5 | 5xpdA | 0.15 | 0.04 | 0.25 | 0.34 | HHpred | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LWAF-VFGILGNIISFVLFLAPVPTFVRICKKKSTEGFQSLPYVSALFNAMLWIYYAMQK--DGTFLLITINAFGCVIETIYIVLFVSY---------------AN------KKTRI-----STLKVLGLFLGFAAIVLVCEL--- | |||||||||||||
6 | 6jbjA | 0.13 | 0.05 | 0.36 | 0.35 | MRFsearch | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EQFVIYQVGLIPSQYYGVLG---NKDLEGFKTLT----FLAVMLIVLNSTLKSFDQFTCISQDVERFCR---QLSSMASKLIISPFTLVYYTYQCFQSTWLGPVSIFGYFILGTVVNKTLMGPIVMKLVH------AEPAAFY-----RAGHVEHMRTDRRTFDYLGSILSYVVIAIPIFSGVY | |||||||||||||
7 | 4mt1A | 0.12 | 0.09 | 0.77 | 0.54 | FFAS-3D | -VISIFIIAAGIFGIKSLPVS---------------------------------QYPSVAAPTITLHAIYERNMNGVEGLDYMSTS-------ADSSGSGSVSLTLPATVQQRSNFLMIVMLSSDVQS----------------TEEMNDYAQRNVVPELQRI------------------EGVGQVRLFGAQRAMRIWVDPKKLQNYNLSADVGSALSIGSLPAVRGQTVTATVTNIYLKDVAKVGSSSTRLNGVNT---TGMAVMLSNSGNMATAKAVKERLAVLEKYFPQGMSWKTPYDTSKFVEISIEKVIHTLIEAMVLVFVVMYLFLQNIRY--------TLIPTIVVPISLLGGFAFISYMGMSINVLTMFAMILVIGIVVDVENVERIMA------------------GEGLPPKEATKKAMGQISGAVIGITAVPLMASSIAFSAF- | |||||||||||||
8 | 6d4hA | 0.08 | 0.07 | 0.88 | 0.72 | SPARKS-K | KFLVVGLLIFGAFAVGLKAANLETNVEELWVEVGGRVSRELNYTRQKIGEEAMFNPQ-------LMIQTPKEEGANVLTTEALQHLDRVHVYMYNRQWKLE---HLCYKSGE-----------LITETGYMDQIIEYLYPCLIITPLDCFWEGAKLQSNFDPLEFLEELKKINYQVDHGYMDRPCLNPADPLDMALVLNGGCHGLSRKYMHWQEELIVG---GTVKNSTGKLVSAHALQTMFQLMTPKQMFKGYEYVSHIN-----WNEDKAAAILEAWQRTYVEVVHQSVAQNSTQKTTTLDDILKSFSVIRVASGYLLMLAYACLTML-------RWDCSKSQGAVGLAGVLLVALSVAAGLGLCSLIGISFNAATTQFLALGVGVDDVFLLTG--------------------QNKRIPFEDRTGECLKRTGASVALTSISNVTAFFMAALIP | |||||||||||||
9 | 5t0oA | 0.10 | 0.07 | 0.73 | 0.88 | CNFpred | ------------------------------------------------------------TLAAISMYSSDGSMSAVDV--YNYITLNVLDELKRVPGVGDANAIGN----RNYSLRIWLKPDLLGITATDVISAVNDQNAQYATGKIG-KSPYVYSITMQGRLQNPSEFENIILRTNND----GSFLRLKDVADVEIGSQQ------------SSQGRLNG--------NDAVPIMINLQ-AELVQAKMQELSKNFKGLTYKIPYDT-TKFVIESIKEVVKTFVEALIL-------VIIVMYMFLKFRATLIPMIAVPVSLLGTFAGLYVLGFSINLLT------LFALILAIGIVVDDAIIVVENIDRILVKDAAIQAMQEVSSPVISIVLVLCAV----------FVPVSFIS-------GFVGEIQRQFALTLAISVTISGFVALTLTPSLC | |||||||||||||
10 | 4ddtA | 0.09 | 0.06 | 0.64 | 0.67 | DEthreader | --------KKEEKEKFEKSFEDLKLSTLEIIRKAERP-LKPGILVV------------------DGILIFETWEFEKNFEDFKVGK----------------INILIGVQAYYGKLTVDLPE------R--------------I--VIFTPSM----------------------KEMFRGVVIPDVYISGRSSRILNG--------------------------------------VLVKG-LLIAEEEIIEE----WLVVESRSETDTSRSLLILGRASSHEAFTA-R---------EITRYGFKKARES-VRFVDFNLVKAQIVRRVQDRWIGFELSGKLRLSGRVQSTVLGWITSALSVQVMDILLFGFITYHRT-RPSTYAKIVEVLFRRGYVYED-K------RVRPTGVMVSYKERYEKYVT-EETTRRLEE--D-------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |