>PF05582 (283 residues) IGDIVVRKSYGKDITFKVIDIREEKGKKIYILKGINIRIIADSPEEDLERTDSEEAGKKD EVFNRKVKESIKNILTSRSESVEVMSGLTLKNKELKNKELYFGRPGKVLHLDGDSQYLEI CMKTYKRIGIDVVGKVISEKEQPSKVVELVKEFKPDIVVITGHDGMLKDTKDYMDLNNYK NSKYFVESVSELRNYERGYDELVIFAGACQSCYEAILGAGANFASSPNRVLIHCLDPVFV CEKVSYTNIEKIVSIEEVIENTITGTKGIGGLQTRGKYREGFP |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 | | | | | | | | | | | | | | | |||||||||||||
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Seq | IGDIVVRKSYGKDITFKVIDIREEKGKKIYILKGINIRIIADSPEEDLERTDSEEAGKKDEVFNRKVKESIKNILTSRSESVEVMSGLTLKNKELKNKELYFGRPGKVLHLDGDSQYLEICMKTYKRIGIDVVGKVISEKEQPSKVVELVKEFKPDIVVITGHDGMLKDTKDYMDLNNYKNSKYFVESVSELRNYERGYDELVIFAGACQSCYEAILGAGANFASSPNRVLIHCLDPVFVCEKVSYTNIEKIVSIEEVIENTITGTKGIGGLQTRGKYREGFP | |||||||||||||||||||
1 | 4bk9A | 0.13 | 0.06 | 0.43 | 0.55 | DisCoVER | ---------------------------------RDIDSV----------------------------------M---------------------------R-LAPVMPVLVI-------------------------E--DIADAKPIAEALVLNVLEVTLRT-------------------CALEAIKIMKEV-----GAVVGAGTVLNALDQAQEAGCEFFVSP-AALLPKFFPFCPTGGIAPYLE-NPSIL--C--VG-------GSWVAASFKRAAV- | |||||||||||||
2 | 2vz8B | 0.05 | 0.03 | 0.70 | 0.83 | DEthreader | --------------PILEKFC--ESGCL--------------PALKACVRIPALNTQP-----------R-VLSRSRVLADCMLGPAEGATSQVRIALTGLSKTFCKYVITGGLGGFGLQLAQ-WL-RLRGALVLTSRTSNAARSLITEATQGPVGGVFNLAMV-LRDA-NQTPFFQDVKPKYSGTANLDRVTREACP-ELDYFVIFSSCGANSAMERICLAVQWIGVVIPQRIASCLEVLDLFLS------------------------------------- | |||||||||||||
3 | 4jgiA | 0.14 | 0.10 | 0.70 | 0.49 | CEthreader | -------------------------VIDLNASAQAMSDGAINEVVDKVMAKADADAAQELIKAFQQGMTKVGERFDSGEYFIGDLIFAGEILQAAMDKLKPALKRAKIVLATVHDIGKNIFRTMAEASGFEVFDLGIDV--PVKIIVDKVKEVNPEIVGLSGV--------------LTLALDSMRETVDALKAEGL-RNDLKVIIGGVPVNENVCQRVGADDFST------NAADGVKICQRWVG------------------------------------- | |||||||||||||
4 | 3zl8A | 0.06 | 0.05 | 0.80 | 0.53 | EigenThreader | TRRFVLNSKEVREG---DVFVAVKGKRFDYAIIAE------RKTVNSDRLVESSVDTLAKLAREKLG-----------------------------------NFSGTVGVTGSSGTTTKEILYNLLKNKREILVLEMAASRPG-DIAHLCKIAPPDVAVLLNVGSAHLEFFGT----RERIMETKMEIIKH-----SKENAIAVTLFDDPDLRKEVPRYRNEGGDYWNGGQLLNIAASLCVMRTLGETVD----IFDLASLKTVPGRFNVREKKGVLIVDDTY | |||||||||||||
5 | 6b8sA | 0.11 | 0.08 | 0.75 | 0.47 | HHpred | ------LIAFGFGYL--EAGTLTNEGNER----PRLFRHIEEE---SLQGFNNYGAVLGARS--------FNRF---AP--YKTPIGINLGKNKYKAVLNQNIGDYYTFNL--NKAFVNELFCMAKEMHKPLFLKIAPDLDDMLEIVNSAIEAGAHGIIATNTTIDKSLV-FAPKEGGLSLTKKSREVFKELAKAFF-NKSVLVSVGGISKEAYERIKMGASLLQI-YSAFIY-NGPNLCQ-NILK------------------------------------- | |||||||||||||
6 | 6oxcA2 | 0.11 | 0.06 | 0.52 | 0.28 | MRFsearch | ----------------------------------------------------VYRDEVGKAPNIAAATELVEKFAEADGR------------------------RPRILIAKMHDRGQKVIATAFADIGFDVDVGS--LFSTPEEVARQAADNDVHVIGVSSLA--------------AGHLTLVPALRDALAQVGR-PDIMIVVGGVPPGDFDELYAAGATAIFP------------------------PGTVIADAAIDLL-------------------- | |||||||||||||
7 | 4qwvA2 | 0.26 | 0.10 | 0.37 | 0.55 | FFAS-3D | ------------------------------------------------------------------------------------------------------VKPQRVLIVDDAAFMRMMLKDIITKAGYEVAGEATNGRE----AVEKYKELKPDIVTM---DITMPEMNG-------------IDAIKEIMKIDPNAKIIVCSAMGQQAMVIEAIKAGADFIVKP-------------------------------------------------------- | |||||||||||||
8 | 2prmA | 0.11 | 0.09 | 0.84 | 0.59 | SPARKS-K | EAVDGLYKMGFGFVEIGSVTPKPNPRPRVFRLPEDQAVINRYG----FNSHGLSVVEHRLRARQQKQAKLTEDAAEDYAEGVRVLGPLA---------------DYLVVNVSSPRRLLTKVLQERDVHRPAVLVKIAPDSQDKEDIASVVKELGIDGLIVTNTTVSRALRSETGGLSGKPLRDLSTQTIREMYALTQGRVPIIGVGGSSGQDALEKIRAGAS-LVQLYT-ALTFWGPPVVGKVKRELEFG---GVTDAADHRR-------------------- | |||||||||||||
9 | 4nd8A | 0.17 | 0.11 | 0.61 | 0.64 | CNFpred | ------------------------------------WMEYNFFGPTKTIESLRAIAAKFDESIQKKCEEVIAKYKPEWEAVVAKYRPRL---------------EGKRVMLYIGGLRPRHVIGAYEDLGMEVVGTGYEF-AHNDDYDRTMKEMGDSTLLYDDVTGY-----------------EFEEFVKRIK-------PDLIGSGI--KEKFIFQKMGIPFR------QMHSWDY-----SGPYHGFDGFAIFARDMDMTL-------------------- | |||||||||||||
10 | 4tr2A | 0.10 | 0.07 | 0.69 | 0.83 | DEthreader | ------------------LESS-------NMSVS-DVEA------------------LQKLQ-EYRNLQWGLDLA-RLDETQD--L------------NANRVSVTKICVIDSGNYHGTHVSGISAVGGSKLVICKARLGDMFKCIDYCI-SRQAHMINGSFSF--------------DEYSNIFNASVEHLRS-L-G---ILFFVSASNRYPILSKTHNNVIAVANNSFNGTSMASPHVAAIASIVNLQIRNAIVKLPS--L--ERVSWYVD-----LAISK | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |