>PF05576 (448 residues) AEPKAVDIKDRLLSIPGMSLIEEKPYTGYRFFVLNYTQPVDHRHPSKGTFQQRITVLHKD VNRPTVFYTGGYNVSTNPSRREPTQIVDGNQVSMEYRYFTPSRPAPADWSKLDIWQAASD QHRIFKALKPLYSKNWISTGGSKGGMTATYYERFYPRDMDGVVAYVAPNDVVNKEDSAYD RFFARVGTDECRDKLNGVQREALVRRAPLEKKYAAYAAENGYTFDTIGSLDRAYEAVVLD YVWGFWQYSTLADCADIPADAKNATDDAIWGSVDAISGFSAYTDQGLETYTPYYYQAGTQ LGAPTIHFPHIEKKYIRYGYQPPRNFVPRSIPMKFEPWAMRDVDTWVRHNARHMLFVYGE NDPWGAERFRLGHGARDSYVLTAPGMNHGANVAGLVPDQKARATARILDWAGVAPAKVQE NPSAARPLATFDARLDQRDVEREPALRP |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 | | | | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | AEPKAVDIKDRLLSIPGMSLIEEKPYTGYRFFVLNYTQPVDHRHPSKGTFQQRITVLHKDVNRPTVFYTGGYNVSTNPSRREPTQIVDGNQVSMEYRYFTPSRPAPADWSKLDIWQAASDQHRIFKALKPLYSKNWISTGGSKGGMTATYYERFYPRDMDGVVAYVAPNDVVNKEDSAYDRFFARVGTDECRDKLNGVQREALVRRAPLEKKYAAYAAENGYTFDTIGSLDRAYEAVVLDYVWGFWQYSTLADCADIPADAKNATDDAIWGSVDAISGFSAYTDQGLETYTPYYYQAGTQLGAPTIHFPHIEKKYIRYGYQPPRNFVPRSIPMKFEPWAMRDVDTWVRHNARHMLFVYGENDPWGAERFRLGHGARDSYVLTAPGMNHGANVAGLVPDQKARATARILDWAGVAPAKVQENPSAARPLATFDARLDQRDVEREPALRP | |||||||||||||||||||
1 | 3jyhA | 0.17 | 0.15 | 0.85 | 1.17 | DEthreader | --------------------------DPGFQERFFQQRLDHFNFERFKTFPQRFLVSDWVRGGPIFFYTGNEGVFANSAVAELAAERGALLVFAEHRYYGKSLSTQGHTELLTVEQALADFAELLRALRRLAQAPAIAFGGSYGGMLSAYLRMKYPHLVAGALAASAPVLAAGLGDSQFFRDVTADFEPKCTQGVREAFRQIKDLFYDVRWEFGTCQP-----L--DEKDLTQLFMFARNAFTVLAMMDNVKGCDRLLS-E-AQRITGLRALAGLVYNYILYHCGTGPDARAWDYQACTEINLTFASNNVMFPD-LPFTDLRQRYCLDTWGVWPRPDWLLTSFWGGDLRAASNIIFSNGNLDPWAGGGIRRN-LSASVIAVTIQGGAHHLDLRASVVEARKLEATIIGEWVKAARRE------------------------------- | |||||||||||||
2 | 3jyhA | 0.16 | 0.14 | 0.85 | 1.17 | DEthreader | -------------------------DP-GFQERFFQQRLDHFNERFGKTFPQRFLVSDWVRGGPIFFYTGNGDVFANAFVAELAAERGALLVFAEHRYYGKSLSTQRHTELLTVEQALADFAELLRALRRDAQAPAIAFGGSYGGMLSAYLRMKYPHLVAGALAASAPVLAAGLDSNQFFRDVTADFEGPCTQGVREAFRQIKDLFYDVRWEFGTCQP-----L--DEKDLTQLFMFARNAFTVLAMMDNVKVGCDRLLSE-AQRITGLRALAGLVYNYDYRLYHGTGDARAWDYQACTEINLTFASNNVDMFPDLPFTELRQRYCLDTWGVWPRPDWLLTSFWGGDLRAASNIIFSNGNLDPWAGGGIRRNL-SASVIAVTIQGGAHHLDLRASDVEARKLEATIIGEWVKAARRE------------------------------- | |||||||||||||
3 | 3jyhA | 0.19 | 0.16 | 0.83 | 7.57 | HHpred | ---------------------------DPGFQERFFQQRLDHFNFENKTFPQRFLVSFWVGEGPIFFYTGNEGDVWAAFVAELAAERGALLVFAEHRYYGKSLPFTGHTELLTVEQALADFAELLRALRRDLDAPAIAFGGSYGGMLSAYLRMKYPHLVAGALAASAPVLAVAGGD--SNQFFRDVTSPKCTQGVREAFRQIKDAYDTVRWEFG-TCQPLSD------EKDLQLFMFARNAFTVMMDYPYKVGCDRLLSE--AQRITGLRALAGLVYNACIYRDPTGPDARAWDYQACTEINLTFASNNDMFPDPFTLQRYCLDTWGVW-----PRPDWLLTSFWGGDLAASNIIFSNGNLDPWAGGGIRRNL-SASVIAVTIQGGAHHLDLRASHPEARKLEATIIGEWVKAARRE------------------------------- | |||||||||||||
4 | 3jyhA | 0.17 | 0.14 | 0.85 | 1.07 | DisCoVER | ---------------------------DPGFQERFFQQRLDHFRFGNKTFPQRFLVSDFWGEGPIFFYTGNEGDFASAFVAELAAERGALLVFAEHRYYGSLSTQRGHTELLTVEQALADFAELLRALRRAQDAPAIAFGGSYGGMLSAYLRMKYPHLVAGALAASAPVLAVAGDSNQFFRDVTADFEGQSPKCTQGVREAFRQIKDLFG-AYDTVRWEFGTCQPLSEKDLTQLFMFARNAFTVLAMMDYNPVKVGCDRLLEQR-ITGLRALAGLVYHCYDIYGCGTPDARAWDYQACTEINLTFASNTDMF--PD-LPFDRQRYCTWG-VWPRPDW-LLTSFG--GLRAASNIIFSNGNLDPWAGGGIRR-NLSASVIAVTIQGGAHHLDLRASPASVVEARKLEATIIG---------------EW--VKAAR------------- | |||||||||||||
5 | 3n2zB | 0.17 | 0.15 | 0.85 | 0.90 | MRFsearch | ------------------------------YSVLYFQQKVDHFGFNVKTFNQRYLVADKKNGGSILFYTGNEGDIIWGFMWDVAEELKAMLVFAEHRYYGESLPFGRHLNFLTSEQALADFAELIKHLKRTINQPVIAIGGSYGGMLAAWFRMKYPHMVVGALAASAPIWQFED-LVPCGVFMKIVTGPHCSESIHRSWDAINRLSNTG-SGLQWLTGALHLCSPLTSQDIQHLKDWISETWVNLAMVPIKVVCQYLKNPSDSLLLQNIFQALNVYYNYSCLNISESLGTLGWSYQACTEVVMPFCTVDDMFEPLKELSDDCFQQWGVR-----PRPSWITTMYGGKISSHTNIVFSNGELDPWSGGGVTKD-ITDTLVAVTISEGAHHLDLRTKVLLARSLEVRHMKNWIRDFYDS------------------------------- | |||||||||||||
6 | 3jyhA | 0.17 | 0.15 | 0.84 | 2.79 | SPARKS-K | ---------------------------DPGFQERFFQQRLDHFNFENKTFPQRFLVSWVRGEGPIFFYTGNEGDVWSAFVAELAAERGALLVFAEHRYYGKSLPFRGHTELLTVEQALADFAELLRALRRDLGAPAIAFGGSYGGMLSAYLRMKYPHLVAGALAASAPVLAVAGLNQFFRDVTADFESPKCTQGVREAFRQIKDLFLTVRWEFG-----TCQPLSDEKDLTQLFMFARNAFTVLAMMDYPKVGCDRLLSE--AQRITGLRALAGLVYNADPTGCGTGPDARAWDYQACTEINLTFASNTDMFPDLFTRQRYCLDTWGV-----WPRPDWLLTSFWGGDLAASNIIFSNGNLDPWAGGGIRRNL-SASVIAVTIQGGAHHLDLRASHVEARKLEATIIGEWVKAARRE------------------------------- | |||||||||||||
7 | 3jyhA | 0.18 | 0.15 | 0.84 | 0.66 | MAPalign | ----------------------------PGFQERFFQQRLDHFRFGNKTFPQRFLVSFWVGEGPIFFYTGNEGDVNSAFVAELAAERGALLVFAEHRYYGKSSTQRGHTELLTVEQALADFAELLRALRLGAQAPAIAFGGSYGGMLSAYLRMKYPHLVAGALAASAPVLAVGLGSNQFFRDVTADFSPKCTQGVREAFRQIKDAYDTVRWEFGTCQ------PLSDEKDLTQLFMFARNAFTVLAMMDVKVGCDRLL-SEAQR-ITGLRALAGLVYLYHSTGCGTGPDARAWDYQACTEINLTFASNTDMF--PLPFTDELRQRYCLDTWGVWPRPWLLTSFGGDLR-AASNIIFSNGNLDPWAGGGIRRNL-SASVIAVTIQGGAHHLDLRASVVEARKLEATIIGEWVKAAR--------------------------------- | |||||||||||||
8 | 3jyhA | 0.18 | 0.15 | 0.86 | 0.56 | CEthreader | ---------------------------DPGFQERFFQQRLDHFRFGNKTFPQRFLVSDRRGEGPIFFYTGNEGDVWSAFVAELAAERGALLVFAEHRYYGKSLPFGAHTELLTVEQALADFAELLRALRRDLDAPAIAFGGSYGGMLSAYLRMKYPHLVAGALAASAPVLAVA-GLGDSNQFFRDVTSPKCTQGVREAFRQIKDLFLQGAYDTVRWEFGTCQPLSD-EKDLTQLFMFARNAFTVLAMMDYPYPTDFLGPLPANLSEAQRITGLRALAGLVYNASGTGPDARAWDYQACTEINLTFASNNTDMFPDLPFTDELRQRYCLDTWGVWPRPDWLLTSFWGDLRAASNIIFSNGNLDPWAGGGIRRNLS-ASVIAVTIQGGAHHLDLRASHVEARKLEATIIGEWVKAARRE------------------------------- | |||||||||||||
9 | 3n2zB | 0.17 | 0.15 | 0.85 | 1.82 | MUSTER | ----------------------------KNYSVLYFQQKVDHFGFNTKTFNQRYLVAWKKNGGSILFYTGNEGDIITGFMWDVAEELKAMLVFAEHRYYGESLPFSRHLNFLTSEQALADFAELIKHLKRTINQPVIAIGGSYGGMLAAWFRMKYPHMVVGALAASAPIWQFED-LVPCGVFMKIVTGPHCSESIHRSWDAINRLSNT-GSGLQWLTGALHLCSPLTSQDIQHLKDWISETWVNLAMVDYKVVCQYLKNPNVSDSLQNIFQALNVYYNYSGLNISESLGTLGWSYQACTEVVMPFCTNGVFEPHSWNLSDDCFQQW-----GVRPRPSWITTMYGGKNSSHTNIVFSNGELDPWSGGGVTKDI-TDTLVAVTISEGAHHLDLRTKNLLARSLEVRHMKNWIRDFYDS------------------------------- | |||||||||||||
10 | 3n2zB | 0.18 | 0.15 | 0.84 | 6.55 | HHsearch | ----------------------------KNYSVLYFQQKVDHFGFNVKTFNQRYLVAYWKNGGSILFYTGNEGDIIWGFMWDVAEELKAMLVFAEHRYYGESLPFSRHLNFLTSEQALADFAELIKHLKRTINQPVIAIGGSYGGMLAAWFRMKYPHMVVGALAASAPIWQFED-LVPCGVFMKIVTGPHCSESIHRSWDAINRGLQWLTGALH-LCSPLTSIQHLKDWISETWVLAMVDYPYAFLAWPIKVVCQYLKNPNVSLLLQNIFQALNVYY---NYSGQESLGTLGWSYQACTEVVMPFCTNGDMFEHSWNESDDCFQQWGVR-----PRPSWITTMYGGKNSSHTNIVFSNGELDPWSGGGVTKDI-TDTLVAVTISEGAHHLDLRTKNALARSLEVRHMKNWIRDFYDS------------------------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |