Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | LWDDVVAGPQPDRGLGRLRKITTTPLVVKEGGEAESSSGKFQRSLSMPASPGAPSTPVTPTTPLSARKDNVWRSVFHPGSNLATRGIGAEVFDKPTHPNSPTVYDWLYSGETRSKHH |
1 | 2lv4A | 0.06 | 0.04 | 0.76 | 0.74 | DisCoVER | | PSPVMSIDKSVLSPGESATITTIVKDIDG--NPVNEVHINKTVARENLK-----------------------GLWDYG--PLKKEVPGKYTQVITYRGHSNERIDISFKYAFTKEI- |
2 | 4dpkA | 0.04 | 0.03 | 0.84 | 0.83 | DEthreader | | -KA--I---ATGLVGIEYRMLHYIKPAYLKPTDPKMDVDIIFSPLP--------QGAAGDHRFVPLLPIIVTTP-CQGAIGEPQLPTAPIPGMSVVIHNTGAAGGIAALYIEK---- |
3 | 6g6mA2 | 0.09 | 0.09 | 1.00 | 0.49 | CEthreader | | QFNDNIVVSGSDDSTVKVWDIKTGQSLRTLQGHQLQFNDNIVVSGSDDSTVKVWDIKTGQSLRTLQGHQSAVTSLQFNDNIVVSGSDDSTVKVWDIKTGQSLRTSAVTSLQFNDNIV |
4 | 3al0B1 | 0.04 | 0.04 | 1.00 | 0.52 | EigenThreader | | TKTKAFCSCPADVAICPVCTPVPNNCKIHKYFYPIATEGFLEIDGDEGDISSFMEKLRSIVVSTGDMEKGAVKNMNSFRFVERALEYEFERIVKAMERGEDVERETTVSMRGKEEES |
5 | 4uxeA | 0.27 | 0.15 | 0.53 | 0.31 | HHpred | | ----------------------------------------------------YPTTPEARTTRWTKNSWSSFVQVFDGGNPPQPSDIGALPSDNA-T-GNLTIRDFLRIGNVRIVP- |
6 | 2pffB | 0.27 | 0.05 | 0.19 | 1.08 | MRFsearch | | ----------GASGLGVLTHR--------------------------------------------------------------------------------TGVRVIVAGTL----- |
7 | 2ftcN | 0.15 | 0.12 | 0.80 | 0.33 | FFAS-3D | | --DTVEILEGKDAGQGKVVQVIRQRNWVVVGGLNT-------HYRYIGKTMDYRGTMIPSEAPLLHRQVKLVDPMDRKPTEIEWRFTEAGERVRVSTRSGRII-------------- |
8 | 3r4rA2 | 0.12 | 0.12 | 0.96 | 0.97 | SPARKS-K | | YTGVYKKENGELLEGFSLTKVAGLNASSKITIFN-TSAVEN----GAFSDLAYPTKPVTFYTYEISDAFKEVILSVQSGVEPKEYPFPANKFIKGNYYRIKGLKEWVLENVEDKEVT |
9 | 3jrsA | 0.14 | 0.04 | 0.31 | 0.33 | CNFpred | | ----------------------------------------------------------------------TRDVNVISGLPANTSRERLDLLDDD-----RRVTGFSITGG------ |
10 | 5twvB | 0.09 | 0.08 | 0.84 | 0.83 | DEthreader | | REVTRRKELR-SAGILLLSLLSLKVAIWAMVFTLCLGLVTSVTVTGALHSLRIILA--LPLHTLRSRLSII----------------EAEIALKLVFSGQRQLCLFIFVVTLVPLLF |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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