Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | DDVKADDLIQSDINELKIAAKRLINDATRLGGLGFGTSFLKWVASFAAIYLLILDRTNWRTNMLTSLLVPYIFFSLPSVIFNFLRGEVGKWIAFIAVVLRLFFPRHFPDWLEMPGSLILLLVVAPNFFAHTLKDHWVGVVICLLIGCYLLQEHIRASGGFRNSFTQSHGISNTIGIILL |
1 | 5l22B | 0.05 | 0.03 | 0.68 | 0.64 | DisCoVER | | LRNINMRIL-PGE-FV--AI--I---G-----------P-SGSGKSSLVRTIFV-GYLP-----------------QDIE--LF-----EG--TVAENIARFG-EKIIEAALSGAHDVIILGYD--TYI-GPGGITLSGGQRQRIALARALYGN--P-RI-VILDEPKVTTIIVSAIM- |
2 | 4av3A | 0.07 | 0.06 | 0.82 | 0.83 | DEthreader | | ESYIRSGADSFLAHETKAIFKVAIVIAILLMIFTTWQTGVAFLLGAVMSASAGIVGMKMAGMGLSVGGFALGLVLVFQPFAMTVS-----L--S------R---------------LESVGAIVSSIILASYMILGGLYGVAIAALGMLSF-VA--T-SVSVDSYGPNAGAPSIKIVVI |
3 | 4lepA | 0.11 | 0.11 | 1.00 | 0.51 | CEthreader | | DDSRANLVWSACAALIYVSPAIGGWVGDKILGTKRTMLLGAGILSVGYALMTVPTENTWFMFSALGVIVVGNGLFKPYMAVNVGSTFSMLLTPWIKDYVNAQYGNEFGWHAAFAVCCVGILVGLKSLANYGVNKKSLAIVLALAALSVVASAIILEYEDVARVFVYAAGVAVLGIFFHL |
4 | 4zowA | 0.09 | 0.08 | 0.98 | 0.68 | EigenThreader | | NIEQFTLLRFLQGISLCFIGAVGYAAIRESFEIKITALMANVALIAPLLGPLVGAAWIHYGLLQVPIFGALIAGNLLLARLTIMGGWPIMIGLLVAAAATVISSHAYLWMTAGLSIYAFGIGLANAGLVRLTLFASAMGMLQMLIFTVGIEISKHAWL---NGGNGLFNLFNLVNGILW |
5 | 3wajA | 0.17 | 0.15 | 0.89 | 0.28 | HHpred | | -------LGGNDPWYYYRLIENTIHNFPHTYGSYTFGPFLVYLGSIAGII---FSA-TSGSLRAVLAFIPAIGGVLAILVYLLTREVFDKRAAVIAAFLIAIVPGQLLGIWEAFWQVS-----ALGTFLLAYNRWAYGFIIAPIILAFMFFAFVLAGFVNADR-KN-LSLVVTFAVSA- |
6 | 2nq2A | 0.15 | 0.13 | 0.88 | 0.42 | MRFsearch | | --ILTALCVGAGLALSGVVLQGIFRLAIFFGFSLYGLFTSTILFGFGTLALVFLFSFKLLMLILIGMILSGLFSALLPSIVFWLMGSEKLLFFFVPFLLCSSILL--------SLSWRLNLLSLDEKEAKALGKMAPLRWLVIFLSGSLVACQVAISG-----------SIGWVGLIIP |
7 | 4jq6A | 0.10 | 0.08 | 0.80 | 0.70 | FFAS-3D | | --KTSLTVAGLVTGVAFWHYLYMRGVWIYAGETPTVFRYIDWLITVPLQIIEFY----LIIAVFWKLLIASLVMLIGGFIGEAGLGDVVVWIAWLYIIYEIFLFNT------IKWIVTVGWAIYPIGYAWGYFGNEDALNIVYNLADLINKAAFGL----------------------- |
8 | 6w2rA | 0.08 | 0.07 | 0.96 | 0.68 | SPARKS-K | | TTEDERRELEKVARKAIEAAREQLQRALEIARESGTKTAVKLALDVALRVAQEAAKRGNK-------DAIDEAAEVVVRIAEESSDALEQALRVLEEIAKAVLKSEKTEDAKKAVKLVQEAYKAAQRAIEAAKRTIKLAIKLAKLAARAALEVIKRPKS-EEVNEALKKIVKAIQEAVE |
9 | 7d3uA | 0.12 | 0.10 | 0.83 | 0.78 | CNFpred | | -------VWSADPAFAAVIAVLIAMAAFTKSAFPFQAWLPDAMVAATPVSAYLHAAA---MVKAGIYLLLRFSEALHVPVWNLLLITCGMTTAVLGAVFAMQRD-DLKELLAYSTISQLGFLVATIGVGTPA--AMVAAIIHTIAHALFKSSL-----------------FMFVGVVDH |
10 | 6u8yH | 0.09 | 0.08 | 0.94 | 0.83 | DEthreader | | --IGKSLIKPFLVIITLLQTLIASWAFVQVYKGHFAALFILVIAVVSFLMALFNFKAVTVEI-YALFLLLLLGATGMIATGDIFNLFVFMEITAISAYAT----GEAAEASMYIGEFFVVKAGL-YAMARLTKLIAMATLTVFAEIAYSSI-FIGVGGTMINFELMTSSLTIGGATV-K |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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