Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| Seq | MIFTLDMVLNHLTQIFKGFKAYATENNFECDIINTYNHPYLSKITAASSNIIALKFDGTENLFDHNSRAGAFYENALEFSLNFQIYIIAIVLNAQDFDANSRMLMLYGMLSNFLHNKAHKYTLESQSQPEYISKVNFYIYPISNMQTVGLINLGTKYSNHAYSASIAFNASVKAIEILKE |
1 | 3d6yA2 | 0.07 | 0.05 | 0.72 | 0.57 | DisCoVER | | TLVEYP-AL---------------------------GEVFV-LDEEEIRIIQTEAESYSKLKKFIESADGFTN---------NSYGATFSFQPYTIDEM--TY-RHI--FTPVLTNKISDMEITTIPKGRYACIAYNFSPNLKLIKYIADRQLTVVSDVYELIIRVEMKIEIL------- |
2 | 5lq5A | 0.08 | 0.05 | 0.64 | 0.67 | DEthreader | | ---IPDQNQDVLDKRFNLFSKELSKQLD-LVWFGG--L-SGVQARTPNSIVIQRDFKSV--------GSENSRFSHTALNKQVDYHWVA-QGDLENRFGE-FT---------------------LKVNDHKLDARFIKAESKQYKNIEE------------------------KIRL--- |
3 | 6slfA2 | 0.11 | 0.06 | 0.48 | 0.66 | CEthreader | | -----------------------------------------------------------------------------TAASNWRIHIHGEGGHGSRPHLTKDPIVVAASIITKLQTIVSR---------EVDPNEVAVVTVG-------SIEGGKSTNSIPYTVTLGVNTRASNDELSEY |
4 | 3errA | 0.08 | 0.07 | 0.96 | 0.70 | EigenThreader | | SYALKGDLALYELALLRFAMDFMARRGFLPMTLLTGTAEVVLNALHSEALPYAPAFRSEAGSFGKDVRGLMR------VHQFHKVEQYVLTEA--SLEASDRAFQELLENAEEILRLLKWRQVDISEGRYRETHSCSALLDWQARRANLRYRDPEGRVRYAYTLNNTALATPRILAMLLE |
5 | 2ioyA2 | 0.09 | 0.06 | 0.63 | 0.22 | HHpred | | -LVISTLNNPFFVTLKNGAEEKAKELGYKIIVEDSQNDSNVEDLIQQKVDVLLINPVDSDA-------VVTAIKEANSKNIPV----ITIDRSHIAQPALMG-SLGVEMADKYLKGEKIPNFIPAEL----------------------------------------------------- |
6 | 6l3fA1 | 0.09 | 0.04 | 0.52 | 0.43 | MRFsearch | | -----EEELEKQRQLMAHLENLVAKEHAKLYLYGSC-------------------------------------------KSDIDVCLAIEG-------DDINKSEMLLKLAEILESDLQNVQALTR---ARVPIVKLMDP------------------VTGISCAICINN---------- |
7 | 6u5jA | 0.12 | 0.07 | 0.62 | 0.46 | FFAS-3D | | --VTLEALYAAIEQVLRE-------RLPEAQLIGFWPG------VPENTPAVSLEIAELL--PERDPGTGES-----ALLCRLQARIMV------PPGADRQAVSIACGIVRTLREQTWNLSLQPELKSLRVWLVEWTQS---------------------------------------- |
8 | 4wzzA1 | 0.11 | 0.09 | 0.87 | 0.58 | SPARKS-K | | AIIVKSAGNPYNQKESEGYKQVIEANGGKCVIQEPKSATCINNAISQGVDCIAIAANDTDALE----------PALTEAKIHVLSLRKVFVNQAFLWNPIQLGNLAAYASISLVNGTIQSFTVPDKTLGDN-----GSYKITAAADGGTEIILGAPFKFEPSNIAEWAKVY--------- |
9 | 1apbA | 0.09 | 0.06 | 0.64 | 0.63 | CNFpred | | ---------PWFQTEWKFADKAGKDLGFEVIKIAVPTLNAIDSLAASGAKGFVICTPDPKLG-------SAIVAKARGYDMKVIAVDDQFVNAK-MMAATKIGERQGQELYKEMQKRG-----------WDVKESAVMAITAN------------------------------------- |
10 | 4hudA | 0.10 | 0.08 | 0.79 | 1.00 | DEthreader | | ---YNSSFRRYATLMGDLFSNIQIKKFIRVPITYASKEHFMMKLNWVILPRINLHLVDF--S-------------PSPIKMIYELSIF-TR-------YEDDMFQIVEQILPYFQPH-FNTTMYEQFGNDIPFKRDIKIVLM-SA---A-IDEAIDGRRRI-EWSLTFEVNGWMY--I-- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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