>PF05560 (182 residues) DAENRAFYKIFTLKNNNLCKNSTLLEKIFKNNVEEFDFSLVKQNLEHEKNCVITSTMNQT IFFENMNSKEMGNKAYSFFNQTVLNNKGNTSLEEQISDIFDRCVYMNAEKSSSYIKLLEQ DYNQVDMFVSLIFIGPYRHNLILITPVTLHLTLIPKNVKNNSFKNLFSGDMHFNMVTMTH LT |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | DAENRAFYKIFTLKNNNLCKNSTLLEKIFKNNVEEFDFSLVKQNLEHEKNCVITSTMNQTIFFENMNSKEMGNKAYSFFNQTVLNNKGNTSLEEQISDIFDRCVYMNAEKSSSYIKLLEQDYNQVDMFVSLIFIGPYRHNLILITPVTLHLTLIPKNVKNNSFKNLFSGDMHFNMVTMTHLT | |||||||||||||||||||
1 | 1cbyA | 0.13 | 0.13 | 0.98 | 1.02 | MRFsearch | --DLDNFNTVFYVQP-QYINQALHLANAFQGAILNFNFEKALQIANGIPNSAIVKTLNQSVIQQTVEISVMVEQLKKIIQEVLGLVINSTSFWNSVEATIKGTFNLDTQIDEAWIFWHSLSAHNTSYYYNILFSIQNEGAVMAVLPLAFEVSVDVEKQKVLFFTIKDSARYEVKMKALTLVQ | |||||||||||||
2 | 2rciA | 0.13 | 0.13 | 0.96 | 1.08 | CNFpred | ------FNEIFYVE--QYIAQAIRLTNTFQGAILNFNFEKALQIANGLPNAGVTGTINQSVIHQTIEVSVMISQIKEIIRSVLGLVINSANFWNSVVSAITNTFTNLPQVDENWIVWRNLSATQTSYFYKILFSIQNEGRFMAILPIAFEITVDVQQLLFITIKDSARYEVKMKALTVVQAL | |||||||||||||
3 | 2mlwA | 0.09 | 0.06 | 0.65 | 0.71 | DisCoVER | LNLENEHYQAIQL-----AQL----------------FA-HE--V--DDNGQLDALKKAQAQP-----------DL--AI-IAT----NNMTL--KK--SF-LAG--HSVTSYSYSLF------IVSQGGAMMAAGPL-----IITVTPNTAISDIFNTKDWR-LTLQKEEITIGVKGFTP- | |||||||||||||
4 | 2x1cA | 0.08 | 0.07 | 0.79 | 0.83 | DEthreader | RTARDGATGQFITEA-KNAPSHIALRIALEST--SPSQAYD-IVQGMAASAFIGQVLGRMVHTNHELDPLDSWNRHQRMEFL-LDGF-DGTKQ-AFAQLWAD--EDNYPF--SICRAYEEG--RG-ATLFNIIYDHAR------REATVRLGR----PTNPDEMFVMR-------------- | |||||||||||||
5 | 1vt4I | 0.02 | 0.02 | 0.97 | 0.61 | CEthreader | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG----GGGGGGGGGGGG-GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG | |||||||||||||
6 | 6su8A | 0.06 | 0.05 | 0.85 | 0.62 | EigenThreader | LQLLGQELSFDVDVSKLVCGMM---------DA---SGGRNSLNPAGAQYGSGYCDAQCGVQFING-TVNTGSLGACCNAECGSNGVCDKPG------------CGYNPYALGDHNYYGPGK--TVDTTVVTQFLTNTGTLTEIRRLYVQDIWNDPGQFMNWLDSHPDTAVTFSNIRWGDIG | |||||||||||||
7 | 1cbyA | 0.15 | 0.14 | 0.97 | 0.31 | HHpred | -SDLDNFNTVFYV-QPQYINQALHLANAFQGAIDNFNFEKALQIANGIPNSAIVKTLNQSVIQQTVEISVMVEQLKKIIQEVLGLVINSTSFWNSVATIKGTFTNLDTQIDEAWIFWHSLSAHNTSYYYNILFSIQNEDAVMAVLPLAFEVSVDVEKQKVLFFT---IKDSARYEVKMKALT | |||||||||||||
8 | 2mlwA | 0.12 | 0.11 | 0.93 | 0.93 | MRFsearch | ----LPYQVFLNLENEHYYAQAIQLAQLFAHENGQLDLAKALKKAQAQPDLAIIATNNMTLKKS---FSTLSALTTTLSEQLKIEGVLGISQDTYIQNILSHAFDLETQKDKPWFHINAQGHSVTSYSYSLFIVSQGEGAMMAAGPLIITVTPN------TAISDIQKEEITIGVKGFQVVT | |||||||||||||
9 | 1cbyA | 0.12 | 0.11 | 0.95 | 0.52 | FFAS-3D | PSSDLDNFNTVFYVQPQYINQALHLANAFQGAIDNFNFEKALQIANGIPNSAIVKTLNQSVIQQTVEISVMVEQLKKIIQEVLGLVINSTSFWNSVEATIKGTFTLDTQIDEAWIFWHSLSAHNTSYYYNILFSIQNEDTEVKMKALTLVQALHSSNAPIVDIFNVNNYNLY---------- | |||||||||||||
10 | 3ronA | 0.14 | 0.14 | 0.96 | 0.82 | SPARKS-K | ----NNLLSINEIDNPNYILQAIMLANAFQNALVPFSMPKGLEIATITPMGAVVSYVDQNVTQTNNQVSVMINKVLEVLKTVLLSGSVIDQLTAAVTNTFTNL---NTQKNEAWIFWGKETANQTNYTYNVLFAIQNAQGVMYCVPVGFEIKVAVKFFTIQD-SASYNVNIQSLKFAQPLVS | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |