>PF05515 (222 residues) MEPHDQSGSTTRQLDEIRDRRGSQIRSVRLLPWRPFTRFPVCPSGTSPYSRGTHSQPSYV RCQNCERARQWFRAHDGPRCLHQRPDYSRLQAPPDPFQHLNSFEPILLAALSVLRPLPRD IQITIISCACDYFHSVRCASSRYLGSSRSAVKRRAARLNYCYKCGHPLYLNKPHTCRPGR LCSASISERLALLREGPIRSLTENPINARAAHFLAHELLDPR |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 | | | | | | | | | | | | |||||||||||||
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Seq | MEPHDQSGSTTRQLDEIRDRRGSQIRSVRLLPWRPFTRFPVCPSGTSPYSRGTHSQPSYVRCQNCERARQWFRAHDGPRCLHQRPDYSRLQAPPDPFQHLNSFEPILLAALSVLRPLPRDIQITIISCACDYFHSVRCASSRYLGSSRSAVKRRAARLNYCYKCGHPLYLNKPHTCRPGRLCSASISERLALLREGPIRSLTENPINARAAHFLAHELLDPR | |||||||||||||||||||
1 | 1cevA | 0.07 | 0.06 | 0.79 | 0.59 | DisCoVER | GVPMDLGRGVDMGPSAMKL-AVDQVFPLVLGGDHSIAGTLGVAKH-YERL---------GVIWYDAHGDVNTAETSHGMPLAASLGFGHKIKPVVLIGVRSDGEKIYTMTIAYLKERT--DGVHLSLDLD-GLDPDAPGVGTPV-IG--GL--TYRESHAMLAAIITSA----------------------EF-VEVNPILDENKTASVAVALMGSLF---- | |||||||||||||
2 | 5vqdA1 | 0.05 | 0.04 | 0.73 | 0.67 | DEthreader | --YNLSKEQITWVNQTLVLEKLGQLICGA-------PLLIACNGMDGT-LGEVCSEGVWTYEPIIDID-N-NPITNVRTY--IIRMAKAYC-----GGTYGRYQALIEDGA--E--------T-LMSA-HIR-QP-VTRMVNPLI-KDEEIMPGSLSL-CTDATQM--YTCSMPRHEALPTSIQNGERLDEAVARIGMK----------------------- | |||||||||||||
3 | 1vt4I3 | 0.04 | 0.04 | 0.97 | 0.61 | CEthreader | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG | |||||||||||||
4 | 6vp9B1 | 0.05 | 0.05 | 0.91 | 0.57 | EigenThreader | YREMHRPELVTKLYEAAVKNSEEYHSHLFMAYARVGEMSLIMQSISAQDENLSKTMFLPLAERMVEKMVKEDKIEAEAEVELYYMILERLGKTSEIQSRENKCMAMYKKL-----------------SRWPECNALSRRLLLKNSDDWQFYLTYFDSVFRLIEEAWSP--PAEGEHSLEGEVHYSAEKAVKFIEDRITEESKSLRGPHLAKLELIRRLRSQG | |||||||||||||
5 | 3vthA | 0.23 | 0.18 | 0.78 | 0.39 | HHpred | --------VCEDCLRELKDPKDRRY-------RYPFINCTNCGPRFIPYDRAKTSMKVFPMCEKCSRE--YHDPHDCFDC---GPSLSFVGE--------GCFDDEIKCVAKALK----EGKIVAIKGAVNA-------------LDDEAVATLRRRKKR---YGKPFAVMMRDVEEVKKYCIVSPEEERLLLQRRPIVLLKKKGLAKGIAYLLMEEIDFP- | |||||||||||||
6 | 2pffB | 0.12 | 0.09 | 0.74 | 0.50 | MRFsearch | --------------------------GVRVIVAGTLDINPDDDYGFKQGGGGGGGGGGDLYKTSKAAQDVWNRADNHF------------------------KDTYGFSILDIVIN--NPVNLTIHFIRENYSAMIFETIVGKLKTEKIFKEINEHSTSYTFRSESATQFTQ------PALTLMEKAAFEDLKSKGLIPADATFAGHSLGEYAALASLADVM | |||||||||||||
7 | 2futA1 | 0.15 | 0.11 | 0.77 | 0.41 | FFAS-3D | ------------------------------VVWKDVDGVSPIPPKTHPRLYLREQQVPDLKNRNDPKLKKVWAD------IKQEDWKPADIPEVKDLNYLTKDPKVGREAITSIIDTLETATFVTGAIVYDWCYDQLKPE------EKTRFVKAFVRL-AKLECGYPPVKDKSIVGHASEWIRDLLSVGIAI--------YDEFPEYNLAAGRFFKEHLVAR | |||||||||||||
8 | 1kanA | 0.09 | 0.08 | 0.88 | 0.50 | SPARKS-K | MTREERMKIVHEIKERILDKYGDDVKAIGV--YGSLGRMCVMSTEEAEFSHEWTTGEWKVEVNSEEILLDYASQVESDWPLHGQFFSILPSVEAQKFHDAEELFEYAGKWRNIRVQGPTTFLPSLTVQVAMAGAMLIGLHHRICYTTSASVLTEAVK----------------QSDLPSGY-----DHLCQFVMSGQLS---DSEKLLESLENFWNGIQEWT | |||||||||||||
9 | 5odcB | 0.18 | 0.08 | 0.41 | 0.64 | CNFpred | -------------------------------------------------------------------------------------------------------AGVEAATRTVMEKL--GVELVDMTG------ASCCPAPGVFGDQKTWLTLAARNLCIAEEMGVDIVTVCN-------GCYGSLFEAAHLLHDN------------KEALNFVNEKLDKV | |||||||||||||
10 | 3h0gA | 0.05 | 0.04 | 0.70 | 0.67 | DEthreader | RESRGQEFFFHAMAGREGLIDTAVKTATGQRVMEDVNGIQFAYGTIFRG---SDRITRDVQNNATLLFQILLVEFQAVVS---------------------------------M-----VGTLAAQS---------EILNVANIKTPSLNSFSALLKELRNYRALCDVMTSRG--------------LM-AITR-HGINREETILDDCKGISNILAPMGTGA | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |