Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| Seq | TAAGNDQAPQLPTKTVLGFTPPLPTLPQPTELVYTKRRRPKRRSRCRCLCFTMGMFAMGVLMTTTLLVSTFVLTVPMVALRTAPCPAQTFGLGDECVRPVSLDAYNSSNSSEIGAVCGAYSEMPAPDNTTVLIMNLLDCLNIGTNESAGEKLNLTDTPLANCNFSQNSVCSRKRVGVCYAARPLSPLGELIYKARQALRL |
1 | 5ao5A | 0.13 | 0.10 | 0.75 | 1.80 | HHpred | | ---SDNS--PL---KYLNWESDQPDNPSEENCGVIRTE---SSGGWRDCSIAL----------------PYVCKKKP----KVECEPSWQPFQGHCYRLQAE----KRSWQESKKACLRGGGDLVSIHSMAELEFITKQIKQGLNDKLQMNFWSDGSLVSDCVTIWDSPCNQSLPSICKKAGQLS--------------- |
2 | 3zhgA | 0.14 | 0.07 | 0.51 | 1.09 | SPARKS-K | | --------------------------------------------------------------------------------LCRLCPWDWTFLLGNCYFFS----KSQRNWNDAVTACKEVKAQLVIINSDEEQTFLQQTSKAKGPKKEATWLWVDGSTLSDCVEFAGDKCELKKFWICKKSATPC--------------- |
3 | 4qkgA | 0.07 | 0.04 | 0.47 | 0.80 | DisCoVER | | --------------------------------------------------------------------------QAA--CPE--S---WIGFRKCFYFSDDTKNWTSS-QRFCDSQD----ADLAQVE---SFQELNFLLR--YKGPSDHWIGLSWIGECAYLNDKGASSAERKWICSKSDIHVG--------------- |
4 | 1xocA | 0.06 | 0.04 | 0.77 | 0.67 | DEthreader | | -------ENMLYSFLTKLIKELGLAYDVKI---VVFTYSEVLFKLKKDNFYNNALDS----------------VIPDAANVPAT------TDLALSYVYITLDRESVVLNKVREDIAVVQTQIVEWSALVEQMNPWS-QYDIFHSS---QIKKG--NYVWYK-AIYIAEDQPYTFLYPNNHMAYHPKRDLYN-------- |
5 | 3kqgA | 0.07 | 0.05 | 0.67 | 0.49 | CEthreader | | ------------------------------------------------SDLEKASALNTKIRALQGSLENMSKLLKRQNDILQVVSQGWKYFKGNFYYFSLIPK----TWYSAEQFCVSRNSHLTSVTSESEQEFLYKTAGLTKAGMEGDWSWVDDTPFEHCGNIKAAPCDKTFLFICKRPYVPSE-------------- |
6 | 7jptA3 | 0.09 | 0.07 | 0.81 | 0.75 | EigenThreader | | --IPKGRT--------------PKTPDWYNPDRAGIHGPPLIIEGYEEAVLYCAVGLKAIKNKIANISGTWLIDLGKPSAAKVQCSEQWIPFQNKCFLKIKPV------SSQASDTCHSYGGTLPSVLSQIEQDFITSLLPDMEIGLEKINKWTDNRELHCALILNLQKSPFTGHFVQKYSEVKS--------------- |
7 | 3fd4B | 0.15 | 0.09 | 0.57 | 1.57 | HHpred | | ------------------------------------------------------------------TLHTFQVPQNYTKANCTYCNTRTFSYKGCCFYFTKK----KHTWNGCFQACAELYPCTYFYGPTPDLPVVTRNLNAGVYRVGEGNWSLDGGTFKHCTYVSHHECSFLKPCLCVSQRSN---------------- |
8 | 1sl6A | 0.11 | 0.07 | 0.66 | 0.38 | MRFsearch | | ------------------------------------------------KSKLQEIYQELTQLKQQQIYQELTDLKTAFERLCRHCPKDWTFFQGNCYFMSN----SQRNWHDSVTACQEVRAQLVVIKTAEEQNFLQLQTSMGLSDQEGTWQWVDGSPLEDCAEFNDNRCDVDNYWICKKPAA----------------- |
9 | 1yxkB | 0.17 | 0.09 | 0.52 | 0.75 | FFAS-3D | | -----------------------------------------------------------------------------VANCSAPCPQDWIWHGENCYL----FSSGSFNWEKSQEKCLSLDAKLLKINSTADLDFIQQAISPSYPWLWEDGSPLMPHLFRVRGAVSQTYCILAAFSICQKKANL---------------- |
10 | 3vppA | 0.12 | 0.06 | 0.48 | 1.05 | SPARKS-K | | ----------------------------------------------------------------------------------SPCPNNWIQNRESCYYVS----EIWSIWHTSQENCLKEGSTLLQIESKEEMDFITGSLRKIKGSYSGRWLWQDGSSPSVCGYVKSNNCDTWKYFICEKYAL----------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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