Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | VFLVIVGTAIVTFIPRVLPLMVLSRFQLPEWATRWLSYVPISVMAALVAQEIFKHDEKISFSTNNVELLAAIPTFFIAIKTRSLLVTVLVGIIVVMVLR |
1 | 5wudA2 | 0.11 | 0.10 | 0.96 | 1.09 | SPARKS-K | | --PLLYADAIGLGAFASSGASLAYSVSNN--VILVVIVGAITAVGGGVIRDILSNEVPLREFYATTAVIGSFVYFIASDLSVPEDVALIVSFLITLILR |
2 | 4xt1A | 0.06 | 0.06 | 1.00 | 1.00 | DEthreader | | QACLFSIFWWIFAVIIAIPHFMVVTDYLEVSYPIILNVELMLGAFIPLSVISYCYYRISRIVRVIAVVLVFIIFWLPYLTALITESLAFCHCCLNPLLV |
3 | 5ezmA3 | 0.10 | 0.06 | 0.63 | 0.70 | DisCoVER | | ------------------------------------WGKQLIGMAIVAACGLATLNNSFYRAYAVWVAVAFVVMLLGIAVAAVYAMGMYLGFTVALLG- |
4 | 2opxA | 0.06 | 0.05 | 0.91 | 1.00 | DEthreader | | --LPAIERASWLRKISAGIRE-RATEISQQLAEVEVAFTYIFIARKMA-IVIKVLGGTVQAGNKVAMVTKVCL-ELFHAGGADGKHGLHEYLQ--TQ-- |
5 | 4ezcA | 0.07 | 0.07 | 1.00 | 0.51 | CEthreader | | WPDLSALQLLKSLPVGVGQIYGCDNPWGIFLGAILLSSPLMCLHAAIGSLLGIISAPFEDIYAGLWGFNSSLACIAIGGTFMTHLLALACALFTAYLGA |
6 | 4jkvA | 0.08 | 0.08 | 1.00 | 0.57 | EigenThreader | | KVKEAQAAAEQLKTTRNAYIQKCQNPLFTEAEHQDMHSYIAAFGTLFTLATFVADWRNSNRYPAVILFYVNACFFVGSIGWLAQFMALMAGVVWFVVLT |
7 | 5da0A | 0.15 | 0.12 | 0.83 | 0.33 | HHpred | | ---STFVAGAFLMVL----I---------LALQPLLVQIPMAALVAVMMVVAISTDWG-SLRFPKGETVVMLATVAVTVFTHDLSLGVLIGVVLSALFF |
8 | 5da0A | 0.16 | 0.16 | 0.99 | 0.30 | MRFsearch | | -FPVALTLSLVGLLESLLTAQLIDERVLILALQPLLVQIPMAALVAVMMVVAISTFDWGSLRFPKGETVVMLATVAVTVFTHDLSLGVLIGVVLSALFF |
9 | 7cz5R | 0.12 | 0.12 | 0.99 | 0.69 | FFAS-3D | | IYTVGHSISIVALFVAITILVALRRLHCPRNHTQLFTTFILKAGAVFLKDAALFHSDDTDHCSFSTVLCKVSVAASHFATMTNFSWLLAEAVYLNCLL- |
10 | 2vpyC2 | 0.13 | 0.12 | 0.94 | 0.97 | SPARKS-K | | WNGLMAGLFPLTALVLALGLAALLKSPWA--LFPLRVLAGASLLLALLYPLTLPPEARGHLAGFWY--GLFLLLGLGTFWQERL--APWAGLLAAAGLR |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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