Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60
| | | |
| Seq | MTDMTSNTPVEARSHKPPKTEFMVYFAIIFVATLPLATLTWALAAIKSGSFTEKGPVARAWSQARIITPMIFTA |
1 | 5yixA | 0.08 | 0.07 | 0.89 | 1.00 | DEthreader | | ----RLKLPIDRITVQKGEREARQAKKEMVEANLRLVISIAKKYT---NRGLQDLIQEGNIGLMKAVDKFE-YR |
2 | 3dl8G4 | 0.08 | 0.04 | 0.53 | 0.70 | DisCoVER | | -------------------------GVMPYISASIMMQLLTVAIPSLQRLAKEEYTKYLTLFVA---------- |
3 | 5y6pQ1 | 0.05 | 0.04 | 0.85 | 1.00 | DEthreader | | --------YLDNISEESFTAIIRLKVIELINQSSSKIIQEAANRLYTEQPRSIQLL-EIICNEFI-ILKQNI-T |
4 | 3mktA2 | 0.15 | 0.15 | 1.00 | 0.64 | CEthreader | | MDAVQVVAAGSLRGYKDMTAIFHRTFISYWVLGLPTGYILGMTNWLTEQPLGAKGFWLGFIIGLSAAALMLGQR |
5 | 4cv5A | 0.03 | 0.03 | 1.00 | 0.57 | EigenThreader | | NLLGSTIFVTHPDLKRVFQMALAKSVREILLEVVEKSSGIAVKLKTAAIIMVRHLAQSLARATSIEPLKEGIRS |
6 | 5mrwA | 0.14 | 0.09 | 0.68 | 0.28 | HHpred | | ----------------QGFLLIATFLLVLMVLARPLG--SGLARLINDIPLPGTTGVERVLFRALGVS------ |
7 | 5mrwA | 0.15 | 0.09 | 0.64 | 0.33 | MRFsearch | | ---------------AQGFLLIATFLLVLMVLARPLGS--GLARLINDIPLPGTTGVERVLFRA---------- |
8 | 6lt0C3 | 0.13 | 0.11 | 0.81 | 0.41 | FFAS-3D | | ------------KPGLSLRSTFLAQF-LLVLHRKALTLIKYIENLKIDLDLTAEGDLNIIMALAEKIKPGLHS- |
9 | 5jheA3 | 0.07 | 0.07 | 0.97 | 0.69 | SPARKS-K | | DDAIMYATYLLEMDNVPNRDQAKAYYRRGNSYLKLDEALQDYIFCKEKNPDDEV--IEQRIEYVNRLIEENKEK |
10 | 4mt1A | 0.16 | 0.11 | 0.69 | 0.63 | CNFpred | | ---------------------IYFQVGFVTVMGLSAKNAILIIEFAKDLQA--GKSAVEAALEAARLRPIIMTS |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|