>PF05387 (277 residues) MNCFLFTLFFVAAPLATASYGSSSGGGGGGSSYLSSASSNGLDELVQAAAGGAQQAGGTI TPANAEIPVSPAEVARLNQVQAQLQALNSNPVYRNLKNSDAIAESLAESSLASKIRQGNI NIVAPNVIDQGVYRSLLVPSGQNNHQVIATQPLPPIIVNQPALPPTQIGGGPAAVVKAAP VIYKIKPSVIYQQEVINKVPTPLSLNPVYVKVYKPGKKIDAPLVPGVQQNYQAPSYGGSS YSAPAASYEPAPAPSYSAAPAQSYNAAPAPSYSAAPA |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | | |||||||||||||
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Seq | MNCFLFTLFFVAAPLATASYGSSSGGGGGGSSYLSSASSNGLDELVQAAAGGAQQAGGTITPANAEIPVSPAEVARLNQVQAQLQALNSNPVYRNLKNSDAIAESLAESSLASKIRQGNINIVAPNVIDQGVYRSLLVPSGQNNHQVIATQPLPPIIVNQPALPPTQIGGGPAAVVKAAPVIYKIKPSVIYQQEVINKVPTPLSLNPVYVKVYKPGKKIDAPLVPGVQQNYQAPSYGGSSYSAPAASYEPAPAPSYSAAPAQSYNAAPAPSYSAAPA | |||||||||||||||||||
1 | 3faqA | 0.02 | 0.01 | 0.64 | 0.67 | DEthreader | DQNRSLLFMQWGQIVDHDLVSYGASRNAVLAGD--FRAS-EQILLATA-----HTLLLREHNRLRELKNGEKLYQEARKILGAFIQIIFRDYLPIVLWINVFTFAFRFG-H--------MEVPS-------LHTLFNRIIKDGGIDPL---SELNKLFQPT----AINLWIGGN---------V-------------SFSRLICD-------------------NTHITKVPL----NNYPHD-FVDCSTVDK------------------------ | |||||||||||||
2 | 5a1uD | 0.06 | 0.06 | 1.00 | 0.56 | CEthreader | VCVWNHETQTLVKTFEVCDLPVRAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYKTCVQTLEGHAQNVSCASFIITGSEDGTVRIWHSSTYRLESTLMERVWCVASLRGNVALGYDEGSIIVKLGREEPAMSMDANGKIIWAKHSEVQQANLKAMGDTEIKDGERLPLAV | |||||||||||||
3 | 2wl2B | 0.07 | 0.06 | 0.87 | 0.55 | EigenThreader | MSVIVGRALVHRRVLYAMNVLGNDWNKAYKARVVGDVIGKYHVYDTIVRMAQPYMLVDGNFGSDSAAAMRY------TIAHELMADL--EKETVVMPTKIPNLLVNG--------------SSG-IAV--GMATNIPPHNIPGPDF-----PTAAIINGRRGIEEAYRTG----RGKV--YIRATIIVHEIPYLVKEKRVEGKDGMRIVIEVKRDAVGEVVLNNLYSQTQLPWQLGNVAAMLEDAARPEWLEPEFGVRDGLYYLTEQQAQAILDLRL | |||||||||||||
4 | 2pffB | 0.18 | 0.12 | 0.68 | 0.44 | HHpred | --DY-LLSIPISCPLIGAHYVVT--------AKLLGFTPGELRSYLKGATGHSQGLVT-AV-AIAETDSSFFVSVRKAITVLFFIGVR---CYEAYPNTS-LPPSILEDSLENN--E----GVPSPMLSISNKTNSHLPAGKQVEISLV-NGAKNLVV-----------SGPP--------------QSLYGTLRKAKAPS--GLDQSRIPFSERKLKFSNRFLPVASPFHSHLLVPAS-------------------------------------- | |||||||||||||
5 | 3ghgK | 0.12 | 0.05 | 0.40 | 0.42 | MRFsearch | --QLQEALLQQERPIRNS--------------------VDELNNNVEAVS-----------------QTSSSSFQYMYLLKDLWQKRQKQEYSSELEKHQLYIDETVNSNIPTNLRVLEMYLIQPDSSVKPYRVYCDMNTENGGWTVIQNR------------------------------------------------------------------------------------------------------------------------------ | |||||||||||||
6 | 6ezoC | 0.13 | 0.12 | 0.91 | 0.46 | FFAS-3D | ----MARETLGLLRQIITDHRWSN--------------AGELMELIRREGRAAQPSETTVGNMVRRVLKIIREEYGRLQLQSNIIE----AINELLVELEGTMENIAAQA-LEHIHSNEVIMTIGF--SRTVEAFLKEAARKRKFHVIVAECAPFCQLSKAGIETTVMTAAIFAVMSRVNKVIIGTKTILANGALRAVTGTTLALAPLIVCAPMFKLSPQFPNEEDSFHKFVAPEEVLPFTEGDILEKVSVHCPVFDYVPPELITLFISNIGGNAPS | |||||||||||||
7 | 3l6wA | 0.11 | 0.11 | 0.95 | 0.68 | SPARKS-K | IFYLALQALDFEVQYEILHALIGGAEKYSMSTLEYSA---FIWIIWQELQKRRVCAGDIMHVPLHSVNNDDFTRENPNAVV-DSHRFNY--KYDNLNLHGHNIEELEEVLRSLRLKSRVFAGFVLSGIRTTVVKVYIKSGTDSDDEYAGSFILG-----GAKEMPWAYERL--YRFDITETVHNLNLTFRFDLKKYDHTELDASVLPAPIIVRRPNNAEIPIGKDVNLPPKVVVKRGTKIMFMSVDEAVTTPMLNKCKVPPFSFHAFELGMYSVESG | |||||||||||||
8 | 3fvsA | 0.06 | 0.02 | 0.37 | 0.49 | CNFpred | ---RTLTIGSAGMTFSATG----------KVGWVLGP-DHIMKHLRTVHQN--------------VFHCPTQSQAAVAESFEREQLLF-----QPSSYFVQFPQAMQRDHMIRSLQSVGLKPIIPQG----YFLITDISD----------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
9 | 6hq6A | 0.07 | 0.05 | 0.69 | 0.67 | DEthreader | ---GDFSNYIALALEYSHKFLNAS------TFDGYNPYRVTGFDADALLKIYHVNFIEKI-------------RPEWNDANNALVGNGV--NLMSVEEIAISYLSEMEGQVVLNLVLDGLKSALF--------------------YLLY-PNKELPKNTISAVSLSLLKSNKQVILVIFVFNGTFYGLGSIYWHMKLLA-L-----NIAYSHTPAGKAQQGTQVDILSRELLRKINILESDLR---------------------------------- | |||||||||||||
10 | 5hamA | 0.11 | 0.10 | 0.90 | 0.54 | MUSTER | TENEITHLLTAQLDEKKFSVQPAFRNTALTEEMLKDYTAKGEEKNKILAEVQETIKIANLIPDKEERALMAKKREEILKLSDAEREKLKNDLLRGGEAQQQINEDILNRATKDIKDNGKEAAVIPIEMGYGHWTVLVAKYDKKDNQIIL------TFNDSLGNSINYDGQK--------------------LPKLIDKTLGNLPNKPIIIDEQTKQQTDQSACGVFTVDNGIKIAKGQAILSTEESKGEKGLREHHAQILTDAMFKQDAQWIRQQ-- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |