>PF05334 (181 residues) GWGYWGSWGKSILSTATATVATVGQGLTQVIEKAETSLGIPSPEELSAQAEKDKTDDSDS SKENKDEEEKTYGMGGAMGMISSGSMGMLSSLTTVVQSTGKTVISGGLDALEFIGKKTMD VIAEGDPGFKKTKGLMNRNSTLSQVLREAKEREEQQKAENVTSETDKKAHYGLLFDEFQG L |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | GWGYWGSWGKSILSTATATVATVGQGLTQVIEKAETSLGIPSPEELSAQAEKDKTDDSDSSKENKDEEEKTYGMGGAMGMISSGSMGMLSSLTTVVQSTGKTVISGGLDALEFIGKKTMDVIAEGDPGFKKTKGLMNRNSTLSQVLREAKEREEQQKAENVTSETDKKAHYGLLFDEFQGL | |||||||||||||||||||
1 | 1eq1A | 0.07 | 0.04 | 0.61 | 0.77 | DisCoVER | AFEMEAKQFNSLVQDFNKALKDGSDSVLQQLSAFSSSLLEARQ-NVEKTA--------------------EELRKAHPDVEKE-ANAFKDK-----------LQAAVQTTVQES------------------QKLAKEVALKIKQA-Y-----------------DFVKHAEEVQKKLAA- | |||||||||||||
2 | 4a01A | 0.07 | 0.05 | 0.73 | 0.83 | DEthreader | FE------------G--GMGMGLAAGLGGGSSMALFGVG---G-AESCAALVVASMLYLIVSVGILVCLLTQATLAIAYGPIAGNTTAAIGKGFAIG--S-AALVSLALF--------GLIVGAMLYWFSAMTMSVSEMIPPGALVM-------------------SLVSGVQIAISSGPN | |||||||||||||
3 | 2b2jA | 0.06 | 0.06 | 0.99 | 0.56 | CEthreader | MYQMMFAAVTIAILTSAIAERAKVSSFILLSALWLTFVHWLWGGGWLAKLGALDFAGGMVVHISSIGKRAGFEEYSIEPHSIPLTLIGAALLWFGWFGFNGGSALAANDVAINAVVVTNTSAAVAGIAGLAAITPAAGFVDVKGAIVIGLVAGIVCYLAMD-FRIKKKIDESLDAWAIHGI | |||||||||||||
4 | 6grjG | 0.04 | 0.04 | 1.00 | 0.58 | EigenThreader | QVPVNQTQINQGLDLAKGHADLYLNTIQPQIITNISNISNYFALQNAIPAVLPPGSTKAQWLRQLSVIKEQATEYQRLSSDTRLVIVNLNNNLITDSSNFQGIVVNLNSKVQNAAIDGAIAGIVAGGLLVIGGAFVTAIGAVVIGGVAGAGGITAGAIVLHNSLGARQDLYQKRSSLNSEV | |||||||||||||
5 | 4hm9A | 0.15 | 0.12 | 0.81 | 0.38 | HHpred | ----------KVLDHAMIGPHKVILGLRTIFPLFMKSPRGTTEKEHEEHVCSILAS-----L--L----RNLR-----------GQQRTRLLNKFTENDSLRRLDAGLFVLQHICYIMAEICNANVPQIRQRVHILNRGSSIKIVRHIIKEYAENIGDGRPEFRENEQKRILGLLENF--- | |||||||||||||
6 | 1eq1A | 0.11 | 0.08 | 0.76 | 0.70 | MRFsearch | --------FEEMEKHAKEFQKTFSEQFNSLVN-------SKNTQDFNKALKDGSDS----------------------------VLQQLSAFSSSLQGAISDANGKAKEALEQAREKTAEELRKAHPDVEKEANAFKDKAAVQTTVQESQKLAKEVASNMEETNKKLAPKIKQAYDDFVK- | |||||||||||||
7 | 5td8B | 0.09 | 0.08 | 0.84 | 0.57 | FFAS-3D | ------------LQELVICLQSCDDYMVTLYKQIIENFMGISVESLLNSSNQETGDGHLQEENENIYLDT------------LNVLVLNKICFKFFENIGVQDFN-MTDLYKPEAQRTQRLLSDCNSFILQMESLLGQINKLNDEIKQLQKDFEVEVKEIEIEYSLLSGHINKYMNE---- | |||||||||||||
8 | 1ls4A | 0.10 | 0.08 | 0.81 | 0.91 | SPARKS-K | ------RPDAAGHVNIAEAVQQLNHTIVNAAHELHETLGLPTPTEQANAFKTKIAEEKHQGSVAEQLNAFARNNNSIHDAATSLNLQD------------------QLNSLQSALTNVGHQWQDIATKTQASAQ--EAWAPVQSALQEAAEKTKEAAANLQNSIQSAVQKPAN-------- | |||||||||||||
9 | 7jh6A | 0.13 | 0.08 | 0.61 | 0.59 | CNFpred | -------------IKQYEKLRQTGDELVQAFQRLREIFDKGDDDSLE---------------------------------------QVLEEIEELIQKHRQL-----ASELPKLELQAIKQYRE-------ALEYV--LPVLAKILEDEEKHIE-----WLKEAAKQGDQWVQLFQRFREA | |||||||||||||
10 | 4uxvA | 0.10 | 0.08 | 0.79 | 0.83 | DEthreader | -----------------AEENADKRFKKANQV--L-----HIDDLLTAAESSIEKILREISDLVTSEEKSREEIEQVREYSSRLAYSIVPKLLADCKQTVPGQIAKLKDGYGEMKEKGY-G---VKDKLD--AE-------HV-AYSLLVEEVASIEKQIEEVKKEHAEYRENLQALRKEL | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |