Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60
| | | |
| Seq | MDNQSESDNSVKRRSGKKVNKQVRGSEKSATKRSVASHAARSFSQRPSGDSAGGNWVLVADKIEVSISFNF |
1 | 4uj8A2 | 0.05 | 0.04 | 0.80 | 0.64 | DisCoVER | | ATVVTKKA---------ELD--LANLDIKDQVLSGIV-SSDTSVIGS-AVKKAGTVTLTLVFNAITVKAP- |
2 | 3kb3B | 0.09 | 0.08 | 0.92 | 0.83 | DEthreader | | ---VSDAF-AVSPFLAALVIVVSNRAVPNQEVCEIARRRILMWHKN--GAPLRGDCQADYLALSIIVIDLK |
3 | 6lvbA2 | 0.07 | 0.07 | 1.00 | 0.57 | CEthreader | | TAWEAPPGEYHYSTNGRRGGRFRGRARAIWGTGMSSFGFDHSGYDGGLVGGGAGGYELDRYDLALGTPPNT |
4 | 5tcp0 | 0.06 | 0.06 | 0.92 | 0.55 | EigenThreader | | EQANEVIAVLQMH---NIEANKIKLGEKARLYSAIEQRLEQSLQTME---GVLSARVHISVHLSALAVYER |
5 | 2wkcD | 0.19 | 0.15 | 0.80 | 0.26 | HHpred | | --AQANEKNTR------TV-----STAKGDKKII-SVPLFESNVKVLPDFIQLGDTVTVSGRVQANYNFVF |
6 | 2pffB | 0.15 | 0.08 | 0.58 | 0.62 | MRFsearch | | ---NPDDDYGFKQGGGQGSQEQGMG-MDLYKTSKAAQDVWNRADN-------------------------- |
7 | 3fyfB | 0.16 | 0.13 | 0.77 | 0.31 | FFAS-3D | | -SLQTRKQREDAKREAWKKERQEKKALEAQQDSVSYVQAINALKNG--------SFVLEADNVV------- |
8 | 5kkpA1 | 0.12 | 0.10 | 0.79 | 0.69 | SPARKS-K | | -----PSEDIFTVLTAEEKQRTSEVIEDTKEKRTIIHQAIKSLFPGLETKTEGKKYIVAYH---------- |
9 | 5munA | 0.35 | 0.08 | 0.24 | 0.50 | CNFpred | | ------------------------------------------------------NQLKVRNNIEIEVSFQG |
10 | 4z3nA | 0.04 | 0.04 | 0.94 | 0.83 | DEthreader | | --MGMLTQVTYAIAIFWL--FGMGLFINGIQIGMGSLLSRAIGMQRLDRAQILSVMGLQGATLVGNWGNQV |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|