Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200 220 240 260
| | | | | | | | | | | | | |
| Seq | YVNPFLYYTSPPAPSGIASFGLYNNSGKVTPYVIETSKVLGYANITSLLAYYKQARKYGVNPYSATLQMNVVLQVNTTQGTFAYWLQDVGSFQTNTNQVTFIDNIWNLTGNPSTLSSSAVSGNGKVASAGSGNTFYYDVGPTFTYSFPFSYVYVVNTSYTSNSVSIWFGYEILQGSQVTSVQYYDKVTISQPGIKSAEITINGNTYTPDGLYYDAELVWGGGGNGAPTQFTHLNSSLGLYYLSSTGVTPIPSLYTFGSNTGESAYNV |
1 | 5olpA | 0.10 | 0.08 | 0.79 | 1.19 | CNFpred | | ------------RPHLIHFNRCKNV--MLDGFKIRESPFWTIHLYMCDGGIVRNLDVRAHGHNNDGIDFEMS---------RNFLVEDCSFDQG-DDAVVIKAGRNQDAWRLNTPCENIVIRNCRILKG--HTLLGIGS----EISGGIRNIYMHDCTAP-NSVMRLFFVKTNHRRGFIENIYMKNVASGT---AQRVLEIDTEVLY-KRITRIDGIYMD------KVTCESADAVYELKGNAELPVKNVR---------------- |
2 | 4hfsA | 0.08 | 0.05 | 0.70 | 0.75 | DisCoVER | | ---AS--E-LPNGIGGRVYLN------------STGAVFTAKIVLPETVKNNDSV---------STPYIYSGFRATS---GTEADIGLQYSKQ----YNVWKPLK--VG----SK--NEETYIE----------KDKFTYNKG-F-RPGSTVQTIYK-NLSGNT-RTLWGTN-ND----GYTGRIITEIQG--TNIGTISK-----------WKTLATAAVSYQRAIKAT--FSTSFNNITID---NKAVTPVVDTQDFAVISVN-- |
3 | 4qhwA2 | 0.05 | 0.03 | 0.69 | 0.83 | DEthreader | | -------------SVHLGY-A---------LPEGDTEWFYNEITVPKEGE------------THSYYAAGFG------------EGYFG-QYNSPT-ERRILFSVWS--P-FDTQNPKE----HIGEF---GSGGQSY-L-KYPWKAGNTYKFLQIRPDGNGNTTYTAYFYATD---EKEWKLIASFLRPK--T-NTWYKR-------------PHSFLENFSPEQGYLSREV-FFGNQWARSEGKWSRLTDATFTHDAT--RDYQG |
4 | 2ac1A2 | 0.09 | 0.06 | 0.69 | 0.92 | CEthreader | | -------LRTKQVKNLRNKVLKSGSRLEVYGVTAAQADVEVLFKVRDLEKADVISKMNVSVKSGLGPFGLMVLASKNL---EEYTSVYFRIFKARKYVVLMCSDQSRSSL------------------KEDNDKTTYGAFVDINPHQPLSLRALIDHSV--------VESFGGK----GRACITSRV----------------YPKLAIGKSSHLFAFNYGY-------QSVDVLNLNAWSMNSAQIS------------------- |
5 | 2exiA2 | 0.04 | 0.03 | 0.67 | 0.87 | EigenThreader | | YDEKDDFDGDTLNHH--FQTATLKARPGHAFVARRWHFVAETKVS--FR----------PTTFQQSAGLVNYYNT-------QNWTTLQITWHE-EKGRILELMTCDH------------------------LVVDQPLRGREIVVDIEYVYLRVTVQA----TTYKYSYSFDG---MNWIDLPVTFESYKLSDDYIK------SRAAFTGAFVGMHCRDG----SGQNN--YADFDYFLYK----EL------------------- |
6 | 6vbu5 | 0.18 | 0.11 | 0.63 | 0.32 | HHpred | | -------------------DSVEDTKG--------NNGDRGRLLVTNLRIVWHSL---ALPRVNLSIGYNCILNITTNSTRFEFIFTNLVRLLPQENVYNKINGVWNLSSDQGNL--------GTFFITNVRIVWHANMNDSFNVSIPYLQALVIESSQQSGGYVL--GFKIDPVEANPIFG----VDYTD--AFVAYF-ADGN------KQQDREPVFSEE--------------------------------------------- |
7 | 4ak1A | 0.11 | 0.08 | 0.73 | 0.62 | MRFsearch | | --------------------------------------NYTIASAMNIQ--------------PGKYILSFKLTTAATDPEKGIFENALEINVRPLIYTPDEGKIEEEGSPETTFQSNIPANTDKITIDPTTGVLSVAAHGEKSVKAVFENVFTLNTVEF-IEPIANFGYADVNENFKGDEVKYEFVNLPT--DLQGELALDLDGNIAIVGQYTVQVMATNT-------KGSETATFTLTITAPNYFTYFRYGNNLG---------- |
8 | 6z9cA2 | 0.14 | 0.06 | 0.42 | 0.47 | FFAS-3D | | -----------------------------------------------------------------NIRVTVIPFYMGMRSHVYWWRYCIRLENLDSDVVQLRERHWSLSGTLETVRGRGVVGREPVLSKEQPAFQYSS-----------------HVSLQASSGHMWGTFRFERPDGSHFDVRIPPFSLESNK-------------------------------------------------------------------------- |
9 | 4indA | 0.15 | 0.14 | 0.93 | 0.78 | SPARKS-K | | RIKVYNTNSFS---VTVTPFFN---NNNTMTYSIGANS---EFEIYDIFTKEGNIYYIQLPPGLAILEFSLERIIHTSGNGGTYAIKMPYSYNNTTTTFTNFQFGTISTSATIPLVISSIPANGLVYLKITGDYFSVTYGGGLGVP--FTFGLEVEEITNFVTQSVTLTQSILNVQGSGSHLRLKYASVSTTAVTQCQLQATNLNRSTTYTVWDF------IAGGSSTDIREINS-IQLVANGGTSSVTITLILVYEQIAGELSHH- |
10 | 3wiqA | 0.10 | 0.07 | 0.73 | 1.17 | CNFpred | | -------------TPGTYIAGVFDKS--AQVTELVNLPNPIGLRIYIN-REFLNPLKCEILEFKRVLDLYRKLRLKDVKGRITTIEGFRFVSMNNKNLIVQKYDVVCENYSAVLNVESFIDATTVNSKDVRVKHYEIDK---KKDFA-DGIYLGITTKDKKYKVGIASSTKVLLN----NQRCYFNRFTKD--GYIITENFEVEAK--QGERYEIEKLTVLVS-------------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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