Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| Seq | MSYLSYYNMFSDFNAGAGVTDTELFTKEEEEAFLPKHDNITGEYNFGFPFKGSSFPNILMRNDIRALIGLILFVLAITTTPVIAVIMIAVASALLPFPSLVIAYCLSVQIINPGNNNATTMSIICVALAIIAIFINSISKTAYIITYIILAVLFCIYAFNLTRSSKNNMNVTRCPRDIRGGDKHSIEK |
1 | 4ezcA2 | 0.06 | 0.04 | 0.71 | 0.67 | DisCoVER | | LKSLPVGVGQ--ICDNPWT-------------GGFLG------AILLSSPLMCLHAAI-----GS-LLGIDIYA--GL--------------WGFNSS-LACIAI--GGT-FMALTQTHLLALACALFTAYLGASHVMVGLPSGTWP--FCLATLLFLNPNI-YKMPISKVTYPEENRIFYLQ----- |
2 | 4mt1A2 | 0.07 | 0.06 | 0.90 | 1.00 | DEthreader | | AKFIDP--FMYLIRYT--LIP-IVV-I--SL--LGGFAFISYMG--ILTMFAMILVIGIV--VDDAIVVVENVERIMAGE--AKKAMGQISGAV-IGITAVLISVFVPLAAMIQVGFVTVMGLSAKNAILIIEFAKDLALEAARLRFRPIIMTSFAFILGVVPLAQRGTTVWGVGLSLV--FYVRKFF |
3 | 1h2sA | 0.04 | 0.03 | 0.91 | 0.51 | CEthreader | | AGRDAGSGERRYYVTLVGISGIAAVAYVVMALGVGWVPVAERTVFAFLGLLAGLDSREFGIVITLNTVVMLAGFAGAMVPGIERYALFGMGAVAFLGLVYYLVGPMTESASQRSSGIKSLYVRLRNLTVILWAIYPFIDVALIVYLDLVTKVGFGFIALDAAATLRAEHGE----------------- |
4 | 6co7A2 | 0.04 | 0.04 | 0.97 | 0.65 | EigenThreader | | YDGGDSSHVHLNKFVPGNTTIKPLLQKEMGKDVVGEVIEELMGDMFESYYRKDGHYF--GIDPLPTPYLDVFLWAVLCNRRELARVLWEAG---REPMAAALMASRLLKRMADISSDLYDHARLFEERAVGVLDECFNENNWEFQAAEMYIHQQQQKNSGTLEERVRALGDRVDCINSQLNRVLDSMS |
5 | 4umvA | 0.12 | 0.07 | 0.63 | 0.31 | HHpred | | ------------------------------------------------------------KENLPLITLIVMMAISWGLNHPFGQLAFIATTLVGLYPIARQALR---LIKS---GSYFAIETLMSVAAIGALFIGATAEAAMVLLLFLIGERLEGWAASRARQGVMALKPETATR-LRNGEREEV-- |
6 | 5y50A | 0.12 | 0.07 | 0.57 | 0.38 | MRFsearch | | ---------------------------EKLGVHT------------------------YTGIVSLFLVCIPLSLLWTYIGDILSLIFATWLIPALFGYATLQPLVRFFQAQS----LILPLVMSSVSSLCIHIVLCWSAAIAIGVSYWLNVTVLGLYMTFSS-------------------------- |
7 | 3jbrE | 0.12 | 0.06 | 0.51 | 0.67 | FFAS-3D | | ---------------------------------------------------------------FCILVGIVLAMTAVVSTTQKEYSISAAAISVFSLGFLIMGTICALMAFRKKRDYLLRPASMFYVFAGLCLFVSLEVACAAFVLLFLGGISLLLFS------------------------------ |
8 | 5yz0A | 0.09 | 0.09 | 0.99 | 0.74 | SPARKS-K | | QELLSIYDCREMETNGPGHQLWRRFPEHVREILEPHLNTRYKSSQKSTDWSGVKKPIYLSKLGSNFAEWSASWAGYLITHDLASKIFTCCSIMMKHVTIYLLPHILVYVLLGCNQE--DQQEVYAEIMAVLKHDDDLCQLSTQTVFSMLDHLTQWARHKFQALKAEKDSMVSTVDYEDYQSVTRFLDL |
9 | 3rkoB | 0.03 | 0.02 | 0.59 | 0.83 | CNFpred | | ------------------------------------------------------LADAMAGPTPVSALIHAATMVTAGVYLIARTHGLFLLHLVGIVGAVTLLLAGFAALVQTDIKRVLAYSTMSQIGYMFLALGVQAAAIFHLMTHAFFKALLFLASGSVILA------------------------ |
10 | 3mk7A | 0.07 | 0.05 | 0.81 | 0.83 | DEthreader | | ------------------SVQRTCQTTLFAPKLAAFTF-----WGWQLVIIVWAYAVFFTLYGNWFFATAFWLITVYWVMSLILLAPSWGGMINGLAFYGMSTFEGPMMAIKTVNALSHTWTIGHVHAGALGVAMVIYINTHFWLATIGTVLYIASMWVNGIAQGLMWRAINDDG------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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