Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200 220 240 260
| | | | | | | | | | | | | |
| Seq | LQIWKNKDYGSTRSIVRIIGKILPLDPCPRPNFELIPLLNSVDSGNCGYVVPSFADILCVANDEEASYLRFRNGIWKNEEEEKSEFFNPLQLVWDPLSPAVKHNKPLKNDPPVSEAAIKKIAALEDELTFLRSQIAAIVKMQELKNSINSASFDLNNEPSGLGPMPSSGTAQLSVEQDPFSSSVLPCPPPPPPLPPQVSSLQPPCSPLIQPGSNNICDSDNSATEMRKQHPGASKANYSRHSKNQKNKDVPNMLDVLKDMNKIKLR |
1 | 1y7iB | 0.08 | 0.06 | 0.68 | 0.57 | DisCoVER | | KHFVLV--HGACH-GGWSWKLKLLE-GHKVTALDLAASRKIEELRTLYDYTLPLKVILVGHGGNLAAVFLFPDSVHNS-------SFVLWLDTQFLPYGEPLTSFFGPKFLAH-----KL--YQ-LCSPEDLALASSLV--R------PS--SLFEDLSKAKYFTDFGVKRVYIV--------------------------------C---------TED---------KGIPEQRWQINIAIEIKGADHA-L--CE--PQLCLA- |
2 | 4lz6A | 0.01 | 0.00 | 0.62 | 0.67 | DEthreader | | -----SERLLLSIPAMIGMFVMAYNFMMIMSGAGIAIVFGNLTILVLSFAANNR-AMVTMVPAVLSVLVRYFSTLSL--HWSDL-M------------------------LSDFYVGVFGLVQRIMMFVMMPMMGIMQAMQPIVGYNYGAKQYSR-------------------------------------------ETVML-FKAQ-----YQSLKPKQALILSLSRQIIFLIPLILGVWWAFPAD------------------ |
3 | 3w15A | 0.06 | 0.06 | 1.00 | 0.59 | CEthreader | | AGSNFGLVGNGKLFILEIDRSGRIVEVNSFLTQDCLFDLAWNESHENQVLVAQGDGTLRLFDTTFKEFPIAIFKEHEREVFSCNWNLVNRQNFLSSSWDGSIKIWSPLRKQSLMTLTPRPLEITKMVDPLNAIILKNCVYQAQFSPHDQNLVLSCSGNSYASLFDIRLPSGKNQNNFLVHSGLEALTCDFNKYRPYVVATGGVDNAIRISCINEIPNAHGLAIRKVTWSPHHSNILMSASYDMTCRIWRDLSNKTNSTDATKGSIF |
4 | 3c9vN | 0.06 | 0.05 | 0.94 | 0.58 | EigenThreader | | FGNDARVKMLRGVNVLAD----AVKVTLGPKGR--NVVLDKSFGAPTITKDGVSVAREIELEDKFENMGA---QMVKEVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTAAVEELKAQVGT------ISANSDETVGKLIAEAMDKVGKEGVITVEDGTGLQDELDVVEGMQFAVELESPFILLAPLLIIAEDIVKVAAVKAPGFGDRRKAMLQDIATLTGGVGEEAAIQGRVAQIRQQIEEATSDYD |
5 | 4rwtD | 0.14 | 0.10 | 0.70 | 0.40 | HHpred | | --LNNIENITT--QTLTRFAEALKDNTVVK-T--FSLANTHADDEITGKGILAIMRALQH--NTVLTELRFHNQ--RHIMGSQEMEIV-KLLKENTTLLRLGY-------HFELPGPR---MSMTSILTRNM-DKQRQKRLQEQKQQEGYD-------------------PP-----P-------PPP-P-PLPEKKLI--------------------TRNIAEVIKQQESAQRALQGQGSGSGGSVGSQPN-SILKEIKNLR-- |
6 | 3edvA2 | 0.12 | 0.03 | 0.26 | 0.30 | MRFsearch | | -------------------------------------------------------------------------------------------------------------DQNTVETLQRMHTTFEHDIQALGTQVRQLQEDAARLQAAY----------------------------------------------------------------------AGDKADDIQKREN----------------EVLEAWKSLLDACESR-- |
7 | 3tvsA1 | 0.12 | 0.09 | 0.73 | 0.49 | FFAS-3D | | --------------------------------------------------------VIWFRHG-----LRLHDN----------PALLAALADKDQGIALIPVDGESAGTKNVGYNLLDSLQDIDDQLQAAAYIFRRLHEWNERDESIRSLCRELNIDFVEKVTADARLEDATFVELDPEFCRSLKLFEQLPTPEHFNVYGDNMGFLAKINWRGGETQALLLLDERLKVERGFYLPNQALPNIHDSPKSMSSVRRFYWSVHDLFKN |
8 | 5yfpC2 | 0.10 | 0.09 | 0.85 | 1.03 | SPARKS-K | | ------------------TSSIYDRIYNFVALMEHIERLLVAELAEDALETPHLLEIHFLLTSARDFQEQVVVMAKEATEDAQRTV---MKLFSRLSGII-----------SKFDKLLDGLTYDIVEMALA-IRLFKIYDLEEREDLRIEAIRNIIK-------KKEIEIEKSSIKKLPNSKNTARLQDETPKVIEYPTNKGLYQEIMSGTISTRTAPRGYKHFLINGINNSISEMEMREKYVGDQKFDVLNMDWIFNELIIVKEH |
9 | 1m2vB | 0.10 | 0.03 | 0.30 | 0.41 | CNFpred | | -----------------------------YCYVQVAVLLSLNN---SQRRIRIITLAMPTTESLAEVYASADQLA-----------------------------------SFYNSKAVEKALSLDDARVLINKSVQDILATYKKEIV----------------------------------------------------------------------------------------------------------------------- |
10 | 6z2wE | 0.08 | 0.06 | 0.76 | 0.67 | DEthreader | | ILNYDNY-HRIWFMRRKLGSW-CKACVEFTFGSIAFLD--------LGFTKF----VCNRTISTALDAAISNR-V---NKTERGTLLKYRVQLTRTSSESLSLRSTLFLQSKD--Q--KKDASDSENANMILCRINNWTDDQE-Q---------------A-FQKKLAPSIALLVIDSNYVINLDILIDFTPTK----KYYGAISYLL------------EMLSKATEDIC-SHVEEALQHCPTYIW-SPLEG-----SK-IRKRS |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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