Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80
| | | | |
| Seq | KATVSYTLFLYREELRRTQSRFMRLNRTKISLTDKLITKSVRNLEKCSIEDLHAINREILFKKKLKYQMQRSKELEKLGLKNA |
1 | 1rccA | 0.10 | 0.10 | 0.99 | 1.33 | DEthreader | | TNLKFHSSYVYLSMASYFVANGLEALQTALKLQKSVNQALLDLHAAMTDFLESYLSESVETIKKLGDHITSLKKLWS-SHPGE |
2 | 4ci6B2 | 0.12 | 0.12 | 1.00 | 1.33 | DEthreader | | HMVLSDLDTMLVALDKAERFSDIGSLMRAHKHLETLLEVLVTLSQPVSSETYSFLNRLAEAKVTLSQQLNTLQQQQESAKQLG |
3 | 6gxjA | 0.10 | 0.10 | 0.99 | 1.33 | DEthreader | | -RNLYLRASYTYLSLGFYFVLTLDAMKAAIVLEKSLNQALLDLHAGLCDFLESFLDEEVKLIKKMGDHLTNIQRLVGSQALGL |
4 | 6gxjA | 0.10 | 0.10 | 0.99 | 1.33 | DEthreader | | LNLYLRASYTYLSLGFYFVGTTLDAMKAAIVLEKSLNQALLDLHAGLCDFLESFLDEEVKLIKKMGDHLTNIQRLVGSQ-AGE |
5 | 4ci6B | 0.12 | 0.12 | 1.00 | 1.33 | DEthreader | | HMVLSDLDTMLVALDKAERFSDIGSLMRAHKHLETLLEVLVTLSQPVSSETYSFLNRLAEAKVTLSQQLNTLQQQQESAKQLG |
6 | 3ucqA | 0.15 | 0.08 | 0.57 | 0.27 | HHpred | | -----------------------LGSMLKDVLTSELAAQVRDAFDD--------DRDAETFLLRLERYGEDLWESLRV----- |
7 | 3qneA1 | 0.07 | 0.05 | 0.72 | 0.65 | DisCoVER | | ------------------EYKEWVKLRFDLDEHNKKLNSVQKEIGEDAKDLIAEKEKLSNEKKEIIEKEAEADKNLRS----- |
8 | 6nuwF | 0.17 | 0.16 | 0.94 | 0.43 | MRFsearch | | --ALDSVFEKYEKEMNQMNNEVKRIYSKKERLLEIILTKIKKKLRQAKFPDIEELQNNERLEAILSREQNLLEETRKLCM--- |
9 | 5cwbA2 | 0.13 | 0.13 | 1.00 | 0.74 | SPARKS-K | | CECVARIVAEIVEALKRSGTSEDEIAEIVARVISEVIRTLKEVIKECVQRIVEEIVEALKREDEINEIVRRVKSEVERTLKES |
10 | 6wngA3 | 0.05 | 0.05 | 1.00 | 0.89 | MAPalign | | ANTLQEEIARLNTNADLFTGAYVIYSSAMKRMAVKLSKICNDLRLNLGKVNPVIPEVVNQVCFKVIGNDLTVTFAAEVMEPVL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|