>PF05300 (194 residues) MDEEERVRVLRGVRLSDEVVNRMKDSDLPSKDQSTSAASGTASAPAAFPSKAGPSASHPA STSTGGAHKPTAAGVGQQYAEEDLYRRYEREQAIIQEELARLAKRERESAHEKLSASILR EKNSTNQERRKAEHLPADLDEWAKELEQKEAELQRLNTFYREQLSSIEKKNLEIYRLTAE QYHTAATNAELRVR |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | MDEEERVRVLRGVRLSDEVVNRMKDSDLPSKDQSTSAASGTASAPAAFPSKAGPSASHPASTSTGGAHKPTAAGVGQQYAEEDLYRRYEREQAIIQEELARLAKRERESAHEKLSASILREKNSTNQERRKAEHLPADLDEWAKELEQKEAELQRLNTFYREQLSSIEKKNLEIYRLTAEQYHTAATNAELRVR | |||||||||||||||||||
1 | 3etzB | 0.08 | 0.03 | 0.33 | 0.65 | DisCoVER | --ERAQADAARALANEQVYNELS--------------------------------------QRAQRLQEANTRFYKSQYQEAA------------------------------------------------------------------------YEDALKKLEAEM----------------QQK-AVISDF- | |||||||||||||
2 | 2qj0A | 0.07 | 0.06 | 0.84 | 0.83 | DEthreader | TSCHVSHFD--Q-SLSPIEAAVAIRNYDIHSQAEH-V-----R--FIDKRFSQPFKKIDKIDANFNPSLFI---DSKPNFISDCFFLTLTYLHYGLGGTLSFEE-KGSEIKALKEEIEKV-KKIAA--NH--DVF-------A--SK-EK-ALK-TTESLRFALQGFAYISKYILSVGAPGFIELYYISYKNQI | |||||||||||||
3 | 6u43A1 | 0.06 | 0.06 | 1.00 | 0.46 | CEthreader | MDFDEEEQKRGITIDSANVSMVHEYEGKEYLINLIDTPGHVDFGGDVTRAMRAVDGAVVNVVPILFINKVDRLIMELKLTPQDMQIRLGAVIDKINKLIKGMKPDSYDGLRLDAAVGKVAFGSALNNWAISVPFMKKTGIGFKEVIEYCMEDQQQKLAERCPLHAVVNDMVIRFLPNPVQAQKERIKVIWHGDK | |||||||||||||
4 | 2tmaA | 0.09 | 0.09 | 1.00 | 0.75 | EigenThreader | KATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAELSEGKCAELEEEIKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKLKYKAI | |||||||||||||
5 | 6f1tX | 0.15 | 0.09 | 0.60 | 0.28 | HHpred | -------------------------------------------------------------------------GKALLERNQDMSRQYEQMHKELTDKLEHLEQEKHETDVKQLQDELERQQLHLREADREKTRAVQELSEQNQRLLDQLSRASEVERQLSMQVHALKEDFREK-NSSTNQHIIRLESLQA--- | |||||||||||||
6 | 6f1tX | 0.15 | 0.10 | 0.65 | 0.53 | MRFsearch | -------------VLAARLGKA------------------------------------------------------LLERNQDMSRQYEQMHKELTDKLEHLEQEKHETDVKQLQDELERQQLHLREADREKTRAVQELSEQNQRLLDQLSRASEVERQLSMQVHALKEDRLESLQAEIKMLSDRKRELEHRLS | |||||||||||||
7 | 2tmaA1 | 0.18 | 0.11 | 0.60 | 0.90 | FFAS-3D | ------------------------------------------------------------------------------EQAEADKKAAEDRSKQLEDELVSLQKKLKEDELDKYSEALKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEERGMKVIESRAQKDEEKMEIQEIQLK | |||||||||||||
8 | 4uosA | 0.13 | 0.09 | 0.65 | 0.92 | SPARKS-K | -------------------------------------------------------------------GDNEEVKKMLEKMIEEIKKMLEKAIKKVKEMLEKMIKEIKKMLEEMAEKILKMVIELAEKILKKAKEMAEKILKKVKELEEVKKMLEKMIEEIKKMLEKAIKKVKEMLEKMIKEIKKMLEKILKKAK | |||||||||||||
9 | 2eflA | 0.10 | 0.07 | 0.66 | 0.54 | CNFpred | --------------MASQIIVDLARYVQE---------------------------------------------------LKQERKSNFHDGRKAQQHIETCWKQLESSKRRFERDCKEADRAQQYFEKMDAD-TKADVEKARQQAQIRHQMAEDSKADYSSILQKFNHEQHEYYHTHIPNIFQKIQEMEERRI | |||||||||||||
10 | 6rlbA | 0.08 | 0.06 | 0.77 | 1.00 | DEthreader | --------------------------------WSRNFDPKLQNLEAGGIRRANYFKVRQTEH---------LQVIWDN-PKELEGYIQKLQNAAERLATENRKLRKWHTTFCEKVVVLMNIDLLRQG--ENLPEINIKVCLNIN-CNPVKTVIDDLIQKLFDLLVLSLKKSIQAHLHEIDTFVTAEMMESHQMI | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |