Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200 220 240
| | | | | | | | | | | | |
| Seq | DNHSTYLFPEIATGHRSRGVSGSNTPVHYKYQITATETYEQDMQFEPPELPDEAESFTMQEITKMRGIDSSYKAGKEETQLVISEAYVSVASYKVRKSVSATLQTILDKQGDIAASSKLQSSSTRSFYLESLATAVMELKSTALRDLRKARVAEIEAVVKDMDSVKIDVSWLKRAVKELAEAVDCFGLYDSAKMEKEECNRGMREGKLEMEELREELRRREKETKECRERVTEMAGRLGKLEMKDSRVTKNLELFQSK |
1 | 5nenA | 0.06 | 0.03 | 0.45 | 0.75 | DisCoVER | | QAPASGIIKNIAVRDGDKVKA--GEVL-V-QLS-----QVQAQAQVDSLRDQYYTTLATEGRLLAER-------------SIV--TFSLRVAIIQTQLTQMDA-ADFDLGN----T-----AI--TS--PV-DG--TV-VGLN-------------------------------T--QG--G--VV-----------------------------------------------GA------HLMD--V--VP------ |
2 | 3c68A | 0.06 | 0.04 | 0.74 | 0.83 | DEthreader | | ---------INR--DYDDHQLEYINF----MASNFDR-LTVWQKVDFTLE----YSIPGALTLRLLETVHKSLAHISTTL-----AF--------LTASQQRWEEYLK-K--GLTNPDATP-EQTRVAVKAIETLNGNWRSPNTVGNQTWPWDTWKQ-AF--------AMAHFNPIAKENIRAVFSWQIQVGYPKLVHDNHYLEAFNGKGERYYRALKLADTFFAKIQENQQGAPNF--------------------- |
3 | 6yvuB | 0.05 | 0.05 | 1.00 | 0.44 | CEthreader | | AFYSVLRDTLVAQNLKQANNVAYGKKRFRVVTVDGKLIDISGTMSGGGNHVAKGLMKLKVDDYTPEEVDKIERELSERENNFRVASDTVHEMEEELKKLRDHEPDLESQISKAEMEADSLASELTLAEQQVKEAEMAYVKAVSDKAQLNVVMKNLERLRGEYNDLQSETKTKKEKIKGLQDEIMKIIKLQMQNSKVESVCQKLDILVAKLKKVKSASKKSGGDVVKFQKLLQNSERDVELSSDELKVIEEQLKHTKLA |
4 | 3jcoR | 0.05 | 0.05 | 0.96 | 0.80 | EigenThreader | | LVNNG---QSDLEHDEKSDSLNEWIKFDQELYNELCKKNESKIKELNEKIQKLEEDDEGQAWINLGEYYAQIGDKDNAEKTLGKSLSKAISTGAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSMIRNRYKTYYGIHCLAVR----NFKEAAKLLVDSLATF---TSIELTSYESIATYASVTGLFTLERTDLKSKVIELLSLILTISLYAFPYLLETYANVLYLNRHADFFVREMRRKVYAQLLESYAFLDNDLGKF |
5 | 2xzrA | 0.12 | 0.05 | 0.40 | 0.42 | HHpred | | ----------------------------------------------------------------------------------------------------------------------------------------------------EDKIEEILSKIYHIEN---EIARIKKLIGAIDGRVTRNTSIEKNSKAIAANTRTLQQHSARLDSQQRQINENHKEMKQIEDKIEEILSKIYHIENEIARIKKLIKLH--- |
6 | 2tmaA | 0.14 | 0.09 | 0.62 | 0.38 | MRFsearch | | -------------------------------------------------------------------------------------------------AIKKKMQMLKLDKENALDRAEQAAEDRSKQLEDELVSLQKKLKGTEELDKYSEALKDAQEKLELAEKKEADVASLNRRIQLVEEELDRAQERATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESD |
7 | 5xg2A | 0.13 | 0.09 | 0.69 | 1.02 | FFAS-3D | | -----------------------------------------------------------GAIVRWGK---RKEKLIEEIRAR-------------EEERNALVVRLGEIDRTFAV-----AREEFDTVVKELEEARKSLYEGEARIKREEEKERLKAEILRLPGLRERAENLRRLVEEKRAEISELEQSFELRIKLSDLEKELELARKDLEKVLAEERAVREEIEVAKRRINELDTLIERERGELAKLRGRIERLERK |
8 | 5cwcA | 0.15 | 0.11 | 0.72 | 0.88 | SPARKS-K | | ---------------------------------------------SEKEELRERLVKICVENAKRKGDDT--------------------------EEAREAAREAFELVREAAERAGIDSSEVLELAIRLIKECVENAQREDISEACRAAAEAFKRVAEAAKRAGISSEVLELAIRLIKECVENAQREGY--DISEACRAAAEAFKRVAEAAKRASETLKRAIEEIRKRVEEAQREISEACRQAEEFRKKAEELKRR |
9 | 5j1iA | 0.09 | 0.05 | 0.60 | 0.68 | CNFpred | | --------------------------------------------------------------------------------------------------KLEQVRSLSAIYLEKLKTISL-VIRGTQGAEEVLRAHEEQLKEAQAVPATLPELEATKASLKKLRAQ---AEAQQPTFDALRDELRGAQVGERLQQRHGERDVEVERWRERVAQLLERWQAVLAQTDVRQRELEQLGRQLRYYRESADPLGAWLQDARRR |
10 | 1sjjA | 0.10 | 0.07 | 0.67 | 0.83 | DEthreader | | -------------------------------LKDDP-----IRTIPWLNA-E-TMQAMQQKLEDFRDYRRLHKP--------------------------------------------LNEIRRLERLDHLAEKFRQKASIESWTDLHQDRVEQIAAIAQELNELDYYSPSVNARCQKICDQWDNLGALTQKRREALERTEKLLETIDQLYLEYAKRAAPFNNWMEGAMEDLQD-TFI-VHTIEEILIFDNKNYTMEH |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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