>PF05244 (240 residues) MRSLQIEGCLFGGNGLCTTPDSPIAAPLTVVLVRRRCGRICALQPYREPVGDVDVATNLC SPSFDDRVIGNNTSDRTPAASILQAANNVRHVAVDVVVGRASVTTVVVATLFESDHSREA VSASEGVRGLAGAVGASRDHVIVDDIAEVTGEGMEFRFIDTNAQTTELDIRELHDGAGAG FITIFTIYARIVRSIVEAQFGEGLEGAEFGFRTGGNAECETSALVPAFTIRAGINVVAAL |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | MRSLQIEGCLFGGNGLCTTPDSPIAAPLTVVLVRRRCGRICALQPYREPVGDVDVATNLCSPSFDDRVIGNNTSDRTPAASILQAANNVRHVAVDVVVGRASVTTVVVATLFESDHSREAVSASEGVRGLAGAVGASRDHVIVDDIAEVTGEGMEFRFIDTNAQTTELDIRELHDGAGAGFITIFTIYARIVRSIVEAQFGEGLEGAEFGFRTGGNAECETSALVPAFTIRAGINVVAAL | |||||||||||||||||||
1 | 4zk9A | 0.04 | 0.03 | 0.68 | 0.90 | DisCoVER | YARFRLQMRVGV-----RHS--PLYTPSNMCMLDI-EDSVEDI--EESTEKEYASTA-TGE-AAGVNVSV-------ALV-GE-GVSIPFSYIGLGFNPSLEDSYLYVNVSSRAPTSLWGIQVLKELLAIIDFSLVTSVDLHVELRDACISPLSLKGKYGDGELVK----------------KEIK-DV-------------------GKN-------------H---NM-CSLNLNP-- | |||||||||||||
2 | 1yiqA | 0.07 | 0.05 | 0.78 | 0.67 | DEthreader | ------MSTGRT-YSPLQILGLA----ATPIYTT---SVVYALDARDGRLIWKYDPQSD-----DAVVLDG----RLESVD-TRADHRSYTITGA-------------GNGGAEFGV-RGYVTRFYAW-SFA-YDP--N-LYIGVGFLSTGDYTATQHMILAELVLMQAPKNGFQWAPAFWGHDWQPAHGKLPYGSADGRIWEQPAASGWGGAFSTFASLAVQYAQVLT----------- | |||||||||||||
3 | 6rtdA | 0.12 | 0.12 | 0.97 | 0.64 | CEthreader | EDIRASQVQPHPLATLPSRPRFEADPLNLFVVVESGDHHVTILDGDFEPIARFPSRYALHGGSPDGRLVYFASRDGWVTLYDLYAEVRAGLNTRNLAVSD---DGRWVLVGNYLPGNLVLLDARDLSLVQVIPAADAQGQASRVSAVYTAPPRHSFVVALKD----VHELWELPYANGKPVAPKRLAVADYLDDFSFSPDYRYLLGSSRQARGGEVIELDSGARVASIPLSGMPHLGSGI | |||||||||||||
4 | 6rtdA | 0.07 | 0.05 | 0.75 | 0.55 | EigenThreader | GGPKFSPDGFASRDGYN------LGLNTRNLAVSDDGRWVLVGNYLPGNLVLLDARDLS---LVQVIPAADAQGQAS-----------RVSAVYTAP-----PRHSFVVALKPHLGSG---------------IYWKGRWVFATPN----ISRGVISVIDLQNWKPLKE---IVTDGPGFFMRS-----------HADFTRDGRYAL-LSVWDRDGALVVYDAHSLERLPMNKPSGKYNV | |||||||||||||
5 | 2g6vB | 0.17 | 0.14 | 0.86 | 0.28 | HHpred | ---YARALKLAQRGRFTTHPNPNVGC----VIVK--DGEIVGEQRAGEPHAEVHAL-R-AGEKAKARVVA--SQDPNPQVYRLQQ-AGID-VSHGLSEGFPYIQLKLGASLDGRSGESQWIT-SPQARRDVQLLRAQSHAILTDDP-ALTELRQPIRIVIDSQNRVTPVHRIVQQP-GE--TWFARTQE--DSREWP---ETVRT-LLIPEH-KGHLDLV--VL--QLG-KQQINSIW-- | |||||||||||||
6 | 6fszBB | 0.09 | 0.07 | 0.77 | 0.35 | FFAS-3D | LRRFESSINTHPH-----------AADGSSYMEQGNNKIITLVKKSQMDTSKALLNVSVNITKFSKFERSKSSHKNERQTSLVRMFEKN-----VMLNIYPRTVIDIEIHVLEQDGGIMGSLINGITLALIDAVGLYDTTPLLDTNSLEENAMSTVTLLLVEDKIPLDRLENVLAIGIAGAHRVRDLMDEELRKHAQKRV---------------------------------------- | |||||||||||||
7 | 6wvsA | 0.08 | 0.05 | 0.70 | 0.49 | SPARKS-K | -------DILIVN----ATDVDEMLKQVEILRRLGAKQIAVVSD------DWRILQEALKKGGD--ILIVNATDVDEMLKQVEILRGAKQIAVVSILLKKGGD----ILIVNATDVDEMLKQVEILRRL---GAKQIAVVSDDLQEALKKGGDILIVNTDVDEMLKQVEILRRLGAKQIAVVSDDWRILQEALKK--------------------------------------------- | |||||||||||||
8 | 6damA | 0.05 | 0.04 | 0.76 | 0.83 | DEthreader | VLRGHEGGPLVVDVAIDQTQAVIWEYT--Q-TVNRG--LQQLTALDGKRVWS----DP-LGMTNISGGVRG-GEGDQW-KIG--GG--TTWGWY--------------YYGSWARGEVKW-VYQ--MT--PH-DEWDYDGINEVVYTLLVA-EKFDSKNQQ---GNHVCMFPAGKDVITGGQFTANVWSGSLATAGGV--------YLKAVDA-TG-KE--L--YRF--KTSGIIGNVN- | |||||||||||||
9 | 2qjgA | 0.14 | 0.12 | 0.85 | 0.35 | MUSTER | ERIFNREEKTVIVPMDHGVSNGPIKRKTVNDVAEGGANAVLLVRHGHRGYGKLSGGTAISPNPLKKVIVTT-------VEEAIRM--GAD--AVSIHVNVGS------------DEDWEAYRDLGMIAETCEYWGMP---LIA----MMYPRGKHIQ-NERDPELVAHAARLGAE-LGADIVKTYTGDIDSFRDVVKG-CPAPV-VVAGGPKTNTDEEFLQMI---KDAMEAGAAGVANI | |||||||||||||
10 | 1yiqA1 | 0.07 | 0.05 | 0.78 | 0.67 | DEthreader | ------MSTGRT-YSPLQILGLA----ATPIYTT---SVVYALDARDGRLIWKYDPQSD-----DAVVLDG----RLESVD-TRADHRSYTITGA-------------GNGGAEFGV-RGYVTRFYAW-SFA-YDP--N-LYIGVGFLSTGDYTATQHMILAELVLMQAPKNGFQWAPAFWGHDWQPAHGKLPYGSADGRIWEQPAASGWGGAFSTFASLAVQYAQVLT----------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |