Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | LNEPEDETHLEAQPTDASAQFIISNLQISTEDLSKEPSISREDLISKEPNVIRSPRQPQNQNPKLPLSIFKEKHLRNASLGSEETTEHAPSDASTTEGKLMELGHKIMKNLENTVKEIIKYLKSLFPPASEVVKP |
1 | 4ff1A1 | 0.10 | 0.10 | 0.94 | 0.70 | DisCoVER | | LVEQKSRTVGSEAPLALRLAKFLNTKDVGKRFANRWVGGLLNIVEQDGDTFKYNEQLL------QTAVLAGLQWRAVSSLAQKIESYWGLSRNAPLGYTKGIPTAMAAEIL-TDVVENIVDMSEIDPDNKKTVL- |
2 | 4a01A | 0.07 | 0.06 | 0.88 | 1.00 | DEthreader | | FGGGSMAFGGGGIYTKAADVGADLVGVERNIPEDDPVIDN-----CGAANV---NAAGKGAIAAAMLPYWFSAMTMKSVSAALKMVEVRFNTILGAK--P--DYATCVKISTDASIKEMIPPGALVM-SLNI--- |
3 | 6bfiA2 | 0.09 | 0.09 | 1.00 | 0.49 | CEthreader | | SGDISRSTLDAVRKCISEGRRVAALAATDETRAKLLAAADELDQILKELEEAAVKLQELEQEIRKALAERVATDFVNVGGPIKALEDAALASPSDRQANFAQKAKEFEAHTARLADTAELVASSGGCSDAVAAEL |
4 | 1i49A | 0.05 | 0.04 | 0.98 | 0.72 | EigenThreader | | LQLGRALTAHLYSLLQTQHALGDAFADLSQKSFGYNAETQKLLCKNG---ETLLGAVNFFVSSINKTMEDTLMTVKQYEAARLEYDAYRTDLEELSLATFQAHRDKYEKLRGDVAIKLKFLEENKIKVMHKQLLL |
5 | 2btpA1 | 0.17 | 0.12 | 0.71 | 0.28 | HHpred | | -----------------------SSGVDLGTENLYFQSMEKTELIQKADDMATCMKAVTEQGAEL----SNEERYKNVVISSIEQKT-------KKLQLIKDYREKVESELRSICTTVLELLDKLIANAT----- |
6 | 4uosA | 0.27 | 0.13 | 0.47 | 0.33 | MRFsearch | | ------------------KKMLEN-------------------------------------------GEDSEKILKKAKE-----------MAEKILKMVIELAEKILKKAKEMAEKILKKVKELGVDNEEVKKM |
7 | 7aqcI | 0.12 | 0.10 | 0.82 | 0.43 | FFAS-3D | | ----------KANPAPPVGPAL-GQAGVNIMGFCKE---FNARTADQAGLIIPSVYEDRSFTFITKTPPAAVLLKKAAGIESGSGEPNRNKVATVKRDKVREIAETKAADVEAAMRMVEGTARSM---------- |
8 | 1ls4A | 0.12 | 0.11 | 0.95 | 0.78 | SPARKS-K | | LPTPDEALNLLTEQANAFKTKIAEVTTSLKQEAEKHQGSVAEQLFARNNNSIHDAATSLNLQD---QLNSLQSALTNVGHQWQDIATKTQASAQEAWAPVQSALQEAAEKTKEAAANLQNSIQSAVQKPAN---- |
9 | 4o46A | 0.14 | 0.04 | 0.31 | 0.38 | CNFpred | | ---------------------------------------------------------------------------------------------EKKIEMVRAYREKIEKELEAVCQDVLSLLDNYLIKNCSETQY |
10 | 4uaqA | 0.03 | 0.03 | 0.85 | 1.00 | DEthreader | | ------------V--TTA-KNTAESEEHAVVTVSHVVGTGRFFSSWE-KLPTLLDAQRVEGLDHNTWNLIAQQRAIIVERRNTLLRVAR--L-SEERLETICRQI-LYHLDRGWADHLAYLADIRESIHLRALGR |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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