Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | MDRNVYEACSNIIKEFGTHVVSADEVLAEKIDNAVPIPFKTREEIDADVEKDRNEGVFEGNIIPDIDLRVVHYYATQLCLNKYPHLINAFDETSLITLGLLIEKWVKDYLTSIQTEQGRQ |
1 | 3jcoR1 | 0.10 | 0.07 | 0.77 | 0.54 | DisCoVER | | NYVEKAFLLT-QSKV---SIEQRKEAA-EF---VLAKIKEEM--APYYK------------YLCE-E--YLVNNGQ-SDLEHDEKSDSLNE-WIKFDQELYNELCKKNELGEYYAQIGD- |
2 | 6vxcA | 0.07 | 0.06 | 0.88 | 0.83 | DEthreader | | HIS---IE--RA-M---YSFHYIENRTL-SINDEIVG-CGDYKKGFLDLKKDIEALLEAMAIACD-AMVILGKRYAEKARQAEKDLLLIATVQQMYWFVHIGVTEL-IW-GKEAIVDIEK |
3 | 6a7uA | 0.10 | 0.09 | 0.95 | 0.56 | CEthreader | | IFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSSSRTVRAELSFSVSQVERSLREG------HYAQRLSRTAPVYLAAVIEYLTAKVLELAGNEAQNS |
4 | 6bugC2 | 0.05 | 0.05 | 0.96 | 0.60 | EigenThreader | | YIMLGFLYKFVLAQIFGSMLFFDFAGYSMFALAVSNLMGIKFMRLVIVLMRN-----KVFKNRNTTSNVAYIINMMVMGFWHGTWYYIAYGIFHGIGLVINDAWLRKKKTINKDRKKAGL |
5 | 1ku1A2 | 0.11 | 0.07 | 0.59 | 0.24 | HHpred | | -------------------GLRVDEAIRI---------------------------LLTKFRLPGSQERIIEAFSSAYCENQDISTQPDADSVFILSYSIIMEDYSGNLKGCCNDFP--- |
6 | 6k5vA | 0.13 | 0.11 | 0.83 | 0.43 | MRFsearch | | --SDPYLSFAAALNGLALHGLANQEVLLWIKSVVEECISKEQLKEYVWKTLNSGKVIPGYLRNTDPRYVCQREFALKHL-----------PDDPLFQLVSKLYEVVPPVLTEL------- |
7 | 6tpaB2 | 0.08 | 0.07 | 0.82 | 0.45 | FFAS-3D | | MAGNFWQSSHYL-----QWILDKQDLLKERQKDLKFLSEEEYWKLQIFFTNVIQA-LGEHLKLRQQVIATATVYFKRFYARYS---LKSIDPVLMAPTCVFLASKVEE------------ |
8 | 5guiA | 0.16 | 0.15 | 0.95 | 0.78 | SPARKS-K | | KAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVRVEVEKIIGRGSGFVA--VEIPFTPRAKRVLELSLEEARQLGHNYIG----SEHLLLGLLREGVAARVLENLGADPSNI |
9 | 1vgpA | 0.18 | 0.14 | 0.80 | 0.60 | CNFpred | | --SDLYSSIVAGISALGGANYEALKMFKEI-----GSPEKVNDYILNRLSNK--QRIMGFGKTYDPRARILKQYAKLLAEKEGG------EIYTLYQIAEKVEEIGIKYLG--------- |
10 | 5w1hA | 0.03 | 0.03 | 0.75 | 1.00 | DEthreader | | ---EFIKL-KTVKEL----YRNQNIGCYR------QAVKAVEEDNNGRYF-------------FIHRIEYGVEKIYANL--KQ-VTEFKARTGYLSEKIWKDLINYISIKYIAMGKAVYY |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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