Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | RLYLPRIVGLGIGFLCVLTALYPEHQPTSVWILLAVNGFIWPHIAYQWSIRSEAPYTTEIRNLLIDALLGGMWVAIMGFNALPAVVIL |
1 | 1sj8A2 | 0.06 | 0.06 | 0.99 | 1.17 | DEthreader | | LLANAVASAAAALVLKAKSVAQRTDSLQTQI-AAATQCALSTSQLVACTKVVAICQEQLVEAGRLVAKAVEGCVSASQTLLRGVGAAA |
2 | 4u5aA | 0.04 | 0.03 | 0.91 | 1.17 | DEthreader | | IEFDKLSDDFSNDINATKQTIKDLFYSFVPEEKLNIIDGILRSFIENNKTHVSYIYIQKEKIKNVCNFILKKLNSLIQIE-------- |
3 | 5ogeA2 | 0.08 | 0.06 | 0.72 | 0.52 | DisCoVER | | --PIYTIFKNLVT-SMELSSF--------------LLMVLSSVVATWGDQLIFFDAPR-NFLSILSIFI---GFLSG---IIYAVAK- |
4 | 3e04D | 0.05 | 0.05 | 0.98 | 1.17 | DEthreader | | EVHEVLLPGLQKLHDALDKSKEFQIITGQEFSGYVQQVKYAMTRIKA-AMP-RIALVELSGAMNTTACSLMKIANDIRNPTQCMAVSF |
5 | 6is6A2 | 0.06 | 0.06 | 1.00 | 0.48 | CEthreader | | MNPYRWFEYSISASFMIVIIAMLTTIYLGTLLALFTLTAVMNLMGLMMELHNQTTQNTNWTSYIIGCIAGFVPWIVIFIPLISAESVP |
6 | 1o5hA | 0.07 | 0.07 | 0.95 | 0.73 | EigenThreader | | PTPGGGAVGSVVGACALAEVANFTRYEDVEIVEARLKLFDLAKKDFEKV----KAYQNALKEAASVPDVLAHELEKLADTLNAADLCH |
7 | 6hwhb | 0.14 | 0.10 | 0.72 | 0.24 | HHpred | | -------------------DISFEVRGVHHWAALMFAASIMVHLARIFFTGAFRRPREANWVIGSLLLILAMFEGFFGYSLP------ |
8 | 4n7wA | 0.13 | 0.12 | 0.97 | 0.25 | MRFsearch | | ---IGPYVGPLLMLIMFAMGVTLRLRPAPVAAATFLHYLIMPLTAWILAMLFRMPPDLSAGMVLVGSVASNVMIYLAKGDVALSVTIS |
9 | 1pv6A | 0.15 | 0.15 | 1.00 | 0.56 | FFAS-3D | | RIGGKNALLLAGTIMSVRIIGSSFATSALEVVILFEVPFLLVGCFKYITSQFEVRFSATIYLVCFMSVLAGNMYESIGFQLVLGLVAL |
10 | 4ryiA | 0.14 | 0.14 | 1.00 | 0.82 | SPARKS-K | | TIGMIWAVLFGLIALSVAIIYNNYGFKPKTFWFLFLLNYIFNQAFSYFQFSQKNLATVDCLLVAITTLLLIMFSSVSAWLLIPYFLWS |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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