Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | IAYDIAVLDDQVFDWAVWDDTYQFVVDGNREYIASNLEETIFISPKINFIIFFDNEGKLIFGKGYDLERRRELPLPPSLLTLGQEKRPVKGIVMLPEGPLLVVVEPILDSSGNGPARGMLLFGRYLDDDRIKRLADTVQLSFTV |
1 | 4xmqA | 0.12 | 0.12 | 0.94 | 1.17 | DEthreader | | VEDFRSTNQSFTRALEKIALPYQSLITENINNVGPILK-YYRHSINALNVYLGLNNGKV-LLSQKS--NDAKPRDLDIKTKDYQLTNIFVTAYLDTKQYVITYSKAIYK---DGKIIGVLGVDIPSE-DLQNLVAKTGTFLFIF |
2 | 4xmqA | 0.10 | 0.10 | 0.94 | 1.17 | DEthreader | | VEDFRSTNQSFTRALEKDANLPYSLITENINNVGPILKY-YRHSINALNVYLGLNN-GKVLLSQKS--NDAKERDLD-IKTYQLKTNIFVTAYLDTKQYVITYSKAIYK-D--GKIIGVLGVDIPSE-DLQNLVAKTTFLIFLN |
3 | 1p0zA | 0.12 | 0.09 | 0.78 | 1.16 | DisCoVER | | ---VGQRALIQAMQISAMPELVEAVQKRDLARIKALI-DPMRSFSDATYITVGDASGQRLYHV------NPDEIGK--SMDSALIAKSYVSVRKGSLGSSLRGKSPIQ-D-ATGKVIGIVSVGYTIE----------------- |
4 | 1p0zA | 0.12 | 0.10 | 0.88 | 1.32 | SPARKS-K | | HYQVGQRALIQAMQISAMPELVEAVQKRDLARIKALIDPMRSFS-DATYITVGDASGQRLYH--VNPDEIGKSMEGGDSDEALINAKSYVSVRKGSLGSSLRGKSPIQDATGK--VIGIVSVGYTIEQLEHH------------ |
5 | 6d8vA | 0.10 | 0.09 | 0.94 | 1.11 | MAPalign | | IAGSVGELAAAARTMSG--VLGRGHAGQS--TAINLLKA-NLQHGFAFGSWFAEEDGAFTPYWSKDRNGNIQSTFKAEWYGLAASGKGAITPYAEGTTTMTSIAYPVMSN---GRMIGVSGVDISLAGVESVKDALSTGTPRMI |
6 | 1p0zA | 0.13 | 0.11 | 0.88 | 1.16 | MUSTER | | HYQVGQRALIQAMQISAMPELVEAVQKRDLARIKALI-DPMRSFSDATYITVGDASGQRLYH--VNPDEIGKSMEGGDSDEALINAKSYVSVRKGSLGSSLRGKSPIQDATGK--VIGIVSVGYT-----IEQLEHH------- |
7 | 2hj9C | 0.15 | 0.14 | 0.92 | 1.17 | DEthreader | | HDSHFAAIQIHHDSNSKSEVIRDFYTDRDTDVLNFFFLSIDQDPHTPEFRFLTDHKG-IIWDDGNA---HFYVNDIDSLANRVSF-SNNWYYINVGSRHMLVRRVPILDP-STGEVLGFSFNAVVLNNFLMEKLKSESN----- |
8 | 2p7jB | 0.12 | 0.11 | 0.96 | 1.17 | DEthreader | | YNNIQDQIETISDLLGHSQSLYDYLREPSKANLTILENSSVARNKLYKQIRFLDTSGTEKVRIKYDFKTIASILRDKRYFKYAQLDQISAWIELEVLSPSLRIL-PISV---NDVRQGYLVLNVDIESSLLNYHIE-AFSHLI- |
9 | 2p7jB | 0.11 | 0.10 | 0.97 | 1.17 | DEthreader | | YNNIQDQIETISDLLGHSQSLYDYLREPSKANLTILENSSVARNKLYKQIRFLDTSGTEKVRIKYDFKTIGSILRKSRYFKAQSLDQISAWIELEVLSPSLRIL-PISV---NDVRQGYLVLNVDIYSSLLNYIELAFSSHLI- |
10 | 6lnpB2 | 0.13 | 0.11 | 0.87 | 1.19 | SPARKS-K | | HHQVGQRALIQAMQISTMPELVEAVQKRDLARIKALIDPM-RSFPDATYITVGDASGQRLYH---VNPDEIGKSMVGDSDEALINAKGYVSVRKGSLGSSLRGKSPILDATG--RVVGIVSVGYTI-EQLES------------ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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